DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpp and nodal

DIOPT Version :10

Sequence 1:NP_477311.1 Gene:dpp / 33432 FlyBaseID:FBgn0000490 Length:588 Species:Drosophila melanogaster
Sequence 2:XP_002936396.2 Gene:nodal / 100497218 XenbaseID:XB-GENE-483209 Length:398 Species:Xenopus tropicalis


Alignment Length:408 Identity:105/408 - (25%)
Similarity:173/408 - (42%) Gaps:80/408 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 SLLSLFNMKRPPKIDRSKII---------IPEPMKKLYAEI----MGHELDSVNIPKPGLLTKSA 280
            |.|...:.|....::|:|.:         :|..|..||...    :.|.:::.  |.|....:| 
 Frog    23 SYLKHMSSKPQDHVNRTKAVGSKDFAALPLPSYMLNLYQSFHHSELSHGMEAA--PSPPSNHRS- 84

  Fly   281 NTVRSFTHKDSKIDDRFPH-HHRFRLHFDVKSIPADEKLKAAELQLTRDALSQQVVASRSSANRT 344
            :.:||...|.      |.| ...:.|.||..|:..||:.:.||::.........:||.       
 Frog    85 DIIRSLAAKS------FDHGGSLWTLVFDFSSLSQDEEHQFAEVRFDFRVFDGAIVAG------- 136

  Fly   345 RYQVLVYDITRVGVRGQREPSYLLLD--TKTVRLNSTDT-VSLDVQPAVDRWLASPQRNYGLLVE 406
             .:|:|....:.....:...|||.:.  |.|:|..|::| |.|:....:.:|....::.      
 Frog   137 -MEVMVDFFHQSSTCQKNSQSYLYVGSITGTLRSRSSETWVMLEATDIIHKWFEKDEKG------ 194

  Fly   407 VRTVRSLKPAPHHHV----RLRRSADEAHERWQH-----KQPLLFTYTDDGRHK-----ARSIRD 457
                   |.....||    :|.| |..|..|:|.     :|.|:..|::..:.:     |..::|
 Frog   195 -------KNNSEAHVKQLEKLAR-AKSAERRYQQQNTEDRQILMMVYSNISKKERLSGTATLLQD 251

  Fly   458 VSGGE-----GGGKGGRNKRQPRRPTRRKNH------------DDTCRRHSLYVDFSDVGWDDWI 505
            .:..:     .|.:...|.|:.||....|.|            ...|||...:|||..:|||.||
 Frog   252 AAHSKYLTVMPGIQTISNSRRHRRSHIFKEHMGMKHVPTAGSSRTLCRRVDFFVDFKQIGWDSWI 316

  Fly   506 VAPLGYDAYYCHGKCPFPLADHFNSTNHAVVQTLVNNMNPGKVPKACCVPTQLDSVAMLYLNDQS 570
            :.|..|:||.|.|:||.|:.:.....|||.:|:|:|....||.|:.||||.::.|::|:|. |..
 Frog   317 IHPQKYNAYRCEGECPSPVNESVKPNNHAYMQSLLNYYAKGKAPEVCCVPIRMSSLSMVYY-DHD 380

  Fly   571 TVVLKNYQEMTVVGCGCR 588
            .:..:|::.|.|..|||:
 Frog   381 DIAFQNHEGMIVEECGCQ 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dppNP_477311.1 TGFb_propeptide 225..444 CDD:480997 52/240 (22%)
TGF_beta_DPP 480..588 CDD:381662 44/119 (37%)
nodalXP_002936396.2 TGF_beta_NODAL 296..398 CDD:381637 42/102 (41%)

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