DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpp and gdf9

DIOPT Version :9

Sequence 1:NP_477311.1 Gene:dpp / 33432 FlyBaseID:FBgn0000490 Length:588 Species:Drosophila melanogaster
Sequence 2:XP_002935305.1 Gene:gdf9 / 100496740 XenbaseID:XB-GENE-478149 Length:421 Species:Xenopus tropicalis


Alignment Length:442 Identity:103/442 - (23%)
Similarity:165/442 - (37%) Gaps:123/442 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   219 DPSTLVEIEKSLLSLFNMKRPPKIDRSKIIIPEP-------MKKLYAEIMGHELDSVNIPKPGL- 275
            |.|.|..:.|.|     .:||...|.:    |.|       ||:||         .::..|.|. 
 Frog    31 DYSLLPPLFKEL-----SERPKWSDNA----PGPNMVAIKYMKRLY---------KMSATKEGFP 77

  Fly   276 -LTKSA--NTVRSFTHK-DSKIDDRFPHHHR--------FRLHFDVKSIPADEKLKAAELQLTRD 328
             |.|:.  ||||.||.: :.|     |...|        ..|.|.|..:.|.|       ||.:.
 Frog    78 RLHKNPVYNTVRLFTPRTECK-----PEREREINGGMQSLDLTFSVDRVSAVE-------QLLQS 130

  Fly   329 ALSQQVVASRSSANRT---RYQVLVYDI-TRVGVRGQREPSYLLLDTKTVRLNSTDTVSLDVQPA 389
            .|...|....||:|.|   ..::|.|:: :.|..|..:...:.|  .|..|     .|.:||...
 Frog   131 LLLYSVSKRFSSSNITCTCSLEILGYELQSTVCPRAPQSFHFQL--RKRQR-----WVEIDVTSI 188

  Fly   390 VDRWLASPQRNYGLLVEVRTVRSLKPAPHHHVRLRRSADEAHERWQHKQPLLFTYTDDGRHKA-- 452
            :..::::.::|..|.:....:::.|   |:..     |.....:.....|.|..|.:|..:||  
 Frog   189 LQPFISNKRQNIHLGLNFTCMKNNK---HYDF-----ATTGPFKMTRSPPSLLLYLNDTSNKAYH 245

  Fly   453 -RSIRDV----------------SGGEGGGKGGRNKRQPRRPTRRKNHD---------------- 484
             |.:.|:                :..||      |.:..:...||:|||                
 Frog   246 RRIMHDIAEQPLYYPVGRIPSILADDEG------NLKLQQMSRRRRNHDYEAILEENTTVVPHTF 304

  Fly   485 -------------DTCRRHSLYVDFSDVGWDDWIVAPLGYDAYYCHGKCPFPLADHFNSTNHAVV 536
                         :.|..|...:.||.:.||.||:||..|...||.|.||..:...:.|..|.:|
 Frog   305 NFSEYLKQFVYSHNECELHRFRLSFSQLNWDKWILAPHRYSPDYCKGVCPRIVGHRYGSPVHTIV 369

  Fly   537 QTLVNNMNPGKVPKACCVPTQLDSVAMLYLNDQSTVVLKNYQEMTVVGCGCR 588
            |.::.......:|:..|||::...:::|.:...:::..|.||:|....|.||
 Frog   370 QNIIYEKVDSSIPRPSCVPSEYRPMSVLTIEPDNSIAYKEYQDMIATKCTCR 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dppNP_477311.1 TGFb_propeptide 225..444 CDD:279078 54/242 (22%)
TGFB 487..588 CDD:214556 30/100 (30%)
gdf9XP_002935305.1 TGF_beta_GDF9 318..421 CDD:381673 30/102 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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