DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpp and nodal5

DIOPT Version :9

Sequence 1:NP_477311.1 Gene:dpp / 33432 FlyBaseID:FBgn0000490 Length:588 Species:Drosophila melanogaster
Sequence 2:XP_002945280.2 Gene:nodal5 / 100495007 XenbaseID:XB-GENE-483267 Length:386 Species:Xenopus tropicalis


Alignment Length:440 Identity:105/440 - (23%)
Similarity:171/440 - (38%) Gaps:139/440 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 TLVEIEKSLLSLFNMK--RPP------KIDRSKII----IPEPMK-KLYAEIMGHELDSVNIPKP 273
            |::.:...:.:|.:.|  |.|      :::.|.::    :|..|| .:|...|...|.|.....|
 Frog    11 TILSLGHGMPTLLHTKEARFPLQGSTQRLESSSVLHGKRLPHDMKYPVYMVQMYQNLISGTDKSP 75

  Fly   274 GL----LTKSANTVRSFTHKD-SKIDDRFPHHHRFRLHFDVKSIPADEKLKAAELQLTRDALSQQ 333
            .:    :.:.::||.|...|. :::|.      ::.|.||:.||....:|:.|||::...:|.  
 Frog    76 SVRGEPVLQESDTVLSLIAKGCTQVDS------QWILSFDMSSISISSELRLAELRIHLPSLE-- 132

  Fly   334 VVASRSSANRTRYQVLVYDITRVGVRGQREPSYLLLDTKTVRLNSTDTVS---LDVQPAVDRWL- 394
                       |:|.:..||..  .:|..|..:  |.:.|:....|...|   .:|...:.|:| 
 Frog   133 -----------RFQNVTLDIYH--TKGNLEKFF--LGSLTIDFPGTSGSSWKVFNVTQMLQRYLY 182

  Fly   395 --------------ASPQRNY-----GLLVE----------------------VRTVRSLK---- 414
                          |:.|...     |||.|                      :.|..|.|    
 Frog   183 QKESFSSDKYTQPKATSQAEQKISCNGLLSERIMLMVFSTDKPSSKLTGSTSLIETAESSKYVIT 247

  Fly   415 ------PAPHHHVRLRRSADEAHERWQHKQPLLFTYTDDGRHKARSIRDVSGGEGGGKGGRNKRQ 473
                  .....|.|.|.:.:.......|.||:                      |.||       
 Frog   248 EADTRETGKRRHRRNRYALNSIIRSSFHSQPV----------------------GDGK------- 283

  Fly   474 PRRPTRRKNHDDTCRRHSLYVDFSDVGWDDWIVAPLGYDAYYCHGKCPFPLADHFNSTNHAVVQT 538
                       ..|||..:.|||..:||.|.|:.|..::||.|.|.||.||.::|..||||.:::
 Frog   284 -----------TLCRRVDMIVDFEKIGWSDRIIYPKRFNAYRCEGSCPIPLNENFKPTNHAYIKS 337

  Fly   539 LVNNMNPGKVPKACCVPTQLDSVAML-YLNDQSTVVLKNYQEMTVVGCGC 587
            |||:.|||:|....|:|.::..::|| |..|:  :|||::::|.|..|||
 Frog   338 LVNHFNPGRVECPSCIPVKMRPLSMLMYEGDE--IVLKHHEDMIVEECGC 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dppNP_477311.1 TGFb_propeptide 225..444 CDD:279078 56/291 (19%)
TGFB 487..588 CDD:214556 45/102 (44%)
nodal5XP_002945280.2 TGFb_propeptide 51..186 CDD:366248 36/157 (23%)
TGF_beta_NODAL 284..385 CDD:381637 43/102 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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