DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpp and tgfb2

DIOPT Version :9

Sequence 1:NP_477311.1 Gene:dpp / 33432 FlyBaseID:FBgn0000490 Length:588 Species:Drosophila melanogaster
Sequence 2:XP_002936067.1 Gene:tgfb2 / 100489680 XenbaseID:XB-GENE-480560 Length:411 Species:Xenopus tropicalis


Alignment Length:425 Identity:98/425 - (23%)
Similarity:159/425 - (37%) Gaps:107/425 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   212 IKDKLK--------PDPSTLVEIEKSLLSLFNM----------KRPPKIDRSKIIIPEPMKKLYA 258
            |..|||        |:|.   |:.:.:::::|.          :|....:|.:.......|::|.
 Frog    44 ILSKLKLNSPPEDYPEPG---EVSQDVIAIYNSTRDLLQEKANERAASCERERSEDEYYAKEVYK 105

  Fly   259 EIMGHELDSVNIPKPGLLTKSANTVRSFTHKDSKIDDRFPHHHRFRLHFDVKSIPAD-EKLKAAE 322
            ..|.....|.|:..|...|.....||                      |||.|:..: ..|..||
 Frog   106 IDMLPYYTSENVIPPSYTTPYFRIVR----------------------FDVSSMEKNASNLVKAE 148

  Fly   323 LQLTRDALSQQVVASRSSANRTRYQVLVYDITRVGVRGQREPSYLLLDTKTVRLNST-DTVSLDV 386
            .::.|        .....|..:..::.:|.|.:  .:....|:...:|:|.|:..:. :.:|.||
 Frog   149 FRVFR--------LMNPKARVSEQRIELYQILK--SKDLASPTQRYIDSKVVKTRAEGEWLSFDV 203

  Fly   387 QPAVDRWLASPQRNYGLLVEVRTVRSLKPA----PHHHVRLRRSADEAHERWQHKQPLLFTYTDD 447
            ..|::.||....||.|..:.:..     |.    |.::..:...::|...|:..... .:.|..|
 Frog   204 TEAINEWLHHKDRNLGFKISLHC-----PCCTFIPSNNYIIPNKSEELETRFAGIDD-AYMYAGD 262

  Fly   448 GRHKARSIRDVSGGEGGGKGGRN-----------KRQPRRPTRRK-----------NHDDTCRRH 490
            .:.|:|....          ||.           :.:.::.:|||           |..|.|...
 Frog   263 PKTKSRKKHT----------GRTPHLLLMLLPSYRLESQQSSRRKKRALDAAYCFRNVQDNCCLR 317

  Fly   491 SLYVDFS-DVGWDDWIVAPLGYDAYYCHGKCPFPLADHFNSTNHAVVQTLVNNMNPGKVPKACCV 554
            .||:||. |:|| .||..|.||:|.:|.|.||:..:   :.|.|:.|.:|.|.:||......|||
 Frog   318 PLYIDFKRDLGW-KWIHEPKGYNANFCAGACPYLWS---SDTQHSRVLSLYNTINPEASASPCCV 378

  Fly   555 PTQLDSVAMLYL--NDQSTVVLKNYQEMTVVGCGC 587
            ...|||:.:||.  |......|.|   |.|..|.|
 Frog   379 SQDLDSLTILYYIGNKPKIEQLSN---MIVKSCKC 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dppNP_477311.1 TGFb_propeptide 225..444 CDD:279078 41/234 (18%)
TGFB 487..588 CDD:214556 40/104 (38%)
tgfb2XP_002936067.1 TGFb_propeptide 21..228 CDD:366248 43/223 (19%)
TGF_beta_TGFB2 314..410 CDD:381655 39/102 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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