DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment VGlut and DAL5

DIOPT Version :9

Sequence 1:NP_001245848.1 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_012686.3 Gene:DAL5 / 853617 SGDID:S000003913 Length:543 Species:Saccharomyces cerevisiae


Alignment Length:613 Identity:124/613 - (20%)
Similarity:190/613 - (30%) Gaps:232/613 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 PGGGHAYDDD--DDRPDSPASFEEIERPP-----LR-KIDKYCKAECPCMPARYTIATMACVGFM 107
            |.|...|..|  |:........:|||..|     || ||| ||.  .|.|...|.:..|..:...
Yeast    43 PNGKIVYISDKVDEAMKLAEEAKEIEVTPEEDRKLRWKID-YCM--FPLMCILYAVQFMDKISTS 104

  Fly   108 IA--FGMRCNMSAAKLKGEHNGTVFMNWTVAVESHVDSSFFWGYLVTQIPGGFIASKFPANKIFG 170
            .|  .|:|.::   |:.|:.     .:|       |.|:|::|||...:.        |...||.
Yeast   105 SAAVMGLRTDL---KMHGDQ-----YSW-------VTSAFYFGYLFMNLG--------PVQFIFQ 146

  Fly   171 LSIVSSATLHLFVPFAMTLMHGHVV--------ICVRVLQGLFEGVTYPACHGI--WRFWAPPME 225
            .:...|..|.:|:.....|:..|..        |.:|||.|..|.|..| |..|  .::|....:
Yeast   147 RTSHMSKMLAVFIVIWGMLLALHAAPTVKYPSFIVLRVLLGCAESVVTP-CFTIITAQYWKTEEQ 210

  Fly   226 RSRLAT-LAFSGSYAGVVVGLPLSGLLADAVGYQAPFYAYGVFGIIWYMFWIWLCFENPRKHPAI 289
            .:|::. ...:|          |..:|.:|:       ||||:                      
Yeast   211 FTRVSIWFGMNG----------LGSILINAI-------AYGVY---------------------- 236

  Fly   290 SIPELKYIEKSLGESAHPTMPSLKTTPWREMMRSMPVYAIIVANFCRSWNFYLLVLFQSSFLKHK 354
             |.:..|..|.                ||.:.....|..|.:......|       ......|.:
Yeast   237 -IHQDSYAIKG----------------WRTLFVITGVITIFIGILIFLW-------IPDDPSKAR 277

  Fly   355 FGFKVEEAGFVGSLPHLIMTTIVPFGGMLADHLRKNGILSTTNVRKLFNCGGFG---------ME 410
            |..|.|:.                   |:...:|.|.             .|||         :|
Yeast   278 FLSKREKL-------------------MVVQRIRSNQ-------------QGFGNHEIKKYQIIE 310

  Fly   411 G-------LFFLFVAHSSTATGAMFALTCGVAFSGFAISGYNVNHLDIAPRYASILMGLSNGIGT 468
            .       |:|||...|:...|.:.:....:..|.|   ||:...        ::||||      
Yeast   311 ALKDVRTWLYFLFTVSSNIPNGGISSFMSILLNSDF---GYSSKE--------TLLMGL------ 358

  Fly   469 LAGIIVPYALDGLIQANPTGCWTTVFTLAACVHLVGCTFYGI---FASGELQP-------WAEPP 523
                             |||          .|.||||..:||   :|:.:..|       ||...
Yeast   359 -----------------PTG----------AVELVGCPLFGILAVYAANKKIPFWKYKLSWAIFA 396

  Fly   524 AEEQKVWAPPPGAITNTDPSQ-AGMLGDYMKETSF---------GAPEYTEQSQMQQSTAISYGA 578
            |....:.:...|..||:..:: ||....|:...||         .:..|:::..:.....::|.|
Yeast   397 AVLALIASCMLGFATNSKKARLAGAYLWYISPVSFICVLSNISANSSGYSKKWTVSSINLVAYAA 461

  Fly   579 TGHVANNPFAMASGAPPIAEEDAPPTYG 606
                     |..:|......:.||..:|
Yeast   462 ---------ANLAGPQTFIAKQAPKYHG 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_001245848.1 MFS 98..512 CDD:119392 84/445 (19%)
MFS_1 101..475 CDD:284993 74/402 (18%)
DAL5NP_012686.3 MFS_FEN2_like 80..496 CDD:340885 113/576 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 52 1.000 Inparanoid score I1824
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.050

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