DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGlut and Slc17a6

DIOPT Version :9

Sequence 1:NP_001245848.1 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_445879.1 Gene:Slc17a6 / 84487 RGDID:620531 Length:582 Species:Rattus norvegicus


Alignment Length:553 Identity:259/553 - (46%)
Similarity:346/553 - (62%) Gaps:37/553 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 GDREGRGPGGGHAYDDDDDRPDSPASFEEIE-RPPLRKIDK---YCKAECPCMPARYTIATMACV 104
            |.:...|...|..|...:.:.|:..:.|..| ..||...:|   .|...|..:|.||.||.|:.:
  Rat    15 GIKNFAGKSLGQIYRVLEKKQDNRETIELTEDGKPLEVPEKKAPLCDCTCFGLPRRYIIAIMSGL 79

  Fly   105 GFMIAFGMRCNMSAAKLKGEHNGTVF-----------MNWTVAVESHVDSSFFWGYLVTQIPGGF 158
            ||.|:||:|||:..|.:...:|.|:.           .||.......:..||||||::||||||:
  Rat    80 GFCISFGIRCNLGVAIVDMVNNSTIHRGGKVIKEKAKFNWDPETVGMIHGSFFWGYIITQIPGGY 144

  Fly   159 IASKFPANKIFGLSIVSSATLHLFVPFAMTLMHGHVVICVRVLQGLFEGVTYPACHGIWRFWAPP 223
            |||:..||::||.:|:.::||::.:|.|..:.:| .||.||:||||.||||||||||||..||||
  Rat   145 IASRLAANRVFGAAILLTSTLNMLIPSAARVHYG-CVIFVRILQGLVEGVTYPACHGIWSKWAPP 208

  Fly   224 MERSRLATLAFSGSYAGVVVGLPLSGLLADAVGYQAPFYAYGVFGIIWYMFWIWLCFENPRKHPA 288
            :|||||||.:|.|||||.|:.:||:|:|....|:.:.||.||.||::|||||:.:.:|:|.|||.
  Rat   209 LERSRLATTSFCGSYAGAVIAMPLAGILVQYTGWSSVFYVYGSFGMVWYMFWLLVSYESPAKHPT 273

  Fly   289 ISIPELKYIEKSLGESAH--PTMPSLKTTPWREMMRSMPVYAIIVANFCRSWNFYLLVLFQSSFL 351
            |:..|.:|||:|:||||:  ..|...| ||||:...||||||||||||||||.||||::.|.::.
  Rat   274 ITDEERRYIEESIGESANLLGAMEKFK-TPWRKFFTSMPVYAIIVANFCRSWTFYLLLISQPAYF 337

  Fly   352 KHKFGFKVEEAGFVGSLPHLIMTTIVPFGGMLADHLRKNGILSTTNVRKLFNCGGFGMEGLFFLF 416
            :..|||::.:.|.:.::|||:||.|||.||.:||.||...|||||.|||:.||||||||....|.
  Rat   338 EEVFGFEISKVGMLSAVPHLVMTIIVPIGGQIADFLRSKQILSTTTVRKIMNCGGFGMEATLLLV 402

  Fly   417 VAHSSTATGAMFALTCGVAFSGFAISGYNVNHLDIAPRYASILMGLSNGIGTLAGIIVPYALDGL 481
            |.:|.|...|:..|...|.||||||||:|||||||||||||||||:|||:|||:|::.|..:..:
  Rat   403 VGYSHTRGVAISFLVLAVGFSGFAISGFNVNHLDIAPRYASILMGISNGVGTLSGMVCPIIVGAM 467

  Fly   482 IQANPTGCWTTVFTLAACVHLVGCTFYGIFASGELQPWAEPPAEEQKVWAPPPGAITNTDPSQAG 546
            .:......|..||.:||.||..|..||.:|||||.||||:|  ||             |...:.|
  Rat   468 TKNKSREEWQYVFLIAALVHYGGVIFYALFASGEKQPWADP--EE-------------TSEEKCG 517

  Fly   547 MLGDYMKETSFGAPEYTEQSQMQQSTAISYGAT 579
            .:.:...:...|  :.| |:.:...|..|||||
  Rat   518 FIHEDELDEETG--DIT-QNYINYGTTKSYGAT 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_001245848.1 MFS 98..512 CDD:119392 221/426 (52%)
MFS_1 101..475 CDD:284993 208/386 (54%)
Slc17a6NP_445879.1 2A0114euk 70..511 CDD:129972 235/457 (51%)
MFS 75..498 CDD:119392 219/424 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342621
Domainoid 1 1.000 440 1.000 Domainoid score I529
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H121617
Inparanoid 1 1.050 498 1.000 Inparanoid score I1323
OMA 1 1.010 - - QHG53923
OrthoDB 1 1.010 - - D144672at33208
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 1 1.000 - - otm46209
orthoMCL 1 0.900 - - OOG6_100421
Panther 1 1.100 - - LDO PTHR11662
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X201
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.910

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