DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGlut and slc17a5

DIOPT Version :9

Sequence 1:NP_001245848.1 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_001072823.1 Gene:slc17a5 / 780284 XenbaseID:XB-GENE-853687 Length:496 Species:Xenopus tropicalis


Alignment Length:498 Identity:172/498 - (34%)
Similarity:259/498 - (52%) Gaps:52/498 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 DDDRPDSPASFEEIERPPLRKIDKYCKAECP------CMPARYTIATMACVGFMIAFGMRCNMSA 118
            |.|..|......|...|      ||....||      |..|||.:|.||.:||.:.:.:|.|:|.
 Frog     5 DSDSGDRSPLLAEYGEP------KYSVQSCPPAKVPVCCSARYNLALMALLGFFMLYALRVNLSV 63

  Fly   119 AKLKGE-------------------------HNGT-VFMNWTVAVESHVDSSFFWGYLVTQIPGG 157
            |.:...                         ||.| ...:|....:..:..|||:||::||||||
 Frog    64 ALVDMVNSTSTPRENTTANICPDHTSAPAVLHNSTGQKYDWDANTQGWILGSFFYGYILTQIPGG 128

  Fly   158 FIASKFPANKIFGLSIVSSATLHLFVPFAMTLMHGHVVICVRVLQGLFEGVTYPACHGIWRFWAP 222
            ::|.|....::.|..|:.:|...|..|.|.....| .:|.||.|:||.||||:||.|.:|..|||
 Frog   129 YVAGKIGGKQLLGFGILGTAVFTLLTPLAADFGAG-CLIAVRALEGLGEGVTFPAMHAMWARWAP 192

  Fly   223 PMERSRLATLAFSGSYAGVVVGLPLSGLLADAVGYQAPFYAYGVFGIIWYMFWIWLCFENPRKHP 287
            |:|||||.:|:::|:..|.||.||:|||:...:.:...||.:|..|::|::.|.:|..:.|:.|.
 Frog   193 PLERSRLLSLSYAGAQLGTVVSLPVSGLICYYMDWIYVFYIFGTLGVLWFIMWCFLVSDTPQSHR 257

  Fly   288 AISIPELKYIEKSLGESAHPTMPSLKTTPWREMMRSMPVYAIIVANFCRSWNFYLLVLFQSSFLK 352
            :|:..|.:||..:|...    :...|:.|...||:|:|::|||||:|..:|.||.|:....:::|
 Frog   258 SITDSEKEYILYTLQNQ----LSYRKSVPCCAMMKSLPLWAIIVAHFSYNWTFYTLLTLLPTYMK 318

  Fly   353 HKFGFKVEEAGFVGSLPHLIMTTIVPFGGMLADHLRKNGILSTTNVRKLFNCGGFGMEGLFFLFV 417
            ....|..:|.||:.:||:|.....:...|::||.||:...:||..|||:||..|.....:|.|..
 Frog   319 EILRFNAQENGFLSALPYLGCWVFMIMAGVIADCLREKLNISTKVVRKIFNTLGMLGPAIFLLAA 383

  Fly   418 AHSSTATG-----AMFALTCGVAFSGFAISGYNVNHLDIAPRYASILMGLSNGIGTLAGIIVPYA 477
            .:    ||     |:..||......||:::||.:|||||||.:|.:|:|::|...|:.|::.|..
 Frog   384 GY----TGCNYSLAVVFLTLSTTLGGFSVAGYGINHLDIAPSFAGLLLGITNTFATIPGMVGPVI 444

  Fly   478 LDGLIQANPTGCWTTVFTLAACVHLVGCTFYGIFASGELQPWA 520
            ...|...|....|..||.:||.::..|..|:.|||||.:|.||
 Frog   445 AKALTHDNTVEQWQIVFYIAAAINFFGAIFFIIFASGNVQDWA 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_001245848.1 MFS 98..512 CDD:119392 152/444 (34%)
MFS_1 101..475 CDD:284993 140/404 (35%)
slc17a5NP_001072823.1 MFS_SLC17A5 43..466 CDD:340939 148/431 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X201
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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