DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGlut and Slc37a2

DIOPT Version :9

Sequence 1:NP_001245848.1 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_001178923.1 Gene:Slc37a2 / 500973 RGDID:1564160 Length:506 Species:Rattus norvegicus


Alignment Length:470 Identity:90/470 - (19%)
Similarity:172/470 - (36%) Gaps:99/470 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 CNMSAAKLKGEH--NGTVFMNWT-------VAVESHVDSSFFWGYLVTQIPGGFIASKFPANKIF 169
            |:.....:...|  |.|.:.:|:       ..:...||::|...|.:.....|....:.|.....
  Rat    54 CSDIVRPINDTHDLNDTTWCSWSPFDKDDYKELLGAVDNAFLVAYAIGMFISGIFGERLPLRYYL 118

  Fly   170 GLSIVSSATLHLFVPFAMTLMHG-------HVV---ICVRVLQGLFEGVTYPA---CHGIWRFWA 221
            ...:|.|.   ||     |.:.|       |::   :.:::..||.:...:|:   |.|   .|.
  Rat   119 SAGMVLSG---LF-----TSLFGLGYFWNIHMLWYFVLIQICNGLVQTTGWPSVVTCVG---NWF 172

  Fly   222 PPMERSRLATLAFSGSYAGVVVGLPLSGLLAD---AVGYQAPFYAYGVFGIIWYMFWIWL----- 278
            ...:|..:..:..|.:..|.::|..::|:..:   .:.:..|.....|.|:|.::|.|..     
  Rat   173 GKGKRGFIMGIWNSHTSVGNILGSLIAGVWVNQHWGLSFIVPGIITAVMGVITFLFLIEYPEDVD 237

  Fly   279 CF---------------ENPRKHPAISIPELKYIEKSLGESAHPTMPSLKTTPWREMMRSMPVYA 328
            |.               |:|...|..|......|..|..:...|...::      ..:.::.:..
  Rat   238 CTPPQHHDDLEKERDNPEDPVNSPYSSRESSVDIAASSSKEQGPEPEAI------SFLGALKIPG 296

  Fly   329 IIVANFCR------SWNF-YLLVLFQSSFLKHKFGFKVEEAGFVGSLPHLIMTTIVPFGGMLADH 386
            :|..:.|.      |:.| |.|.|:..: :.|   |..:|||        .::|:...||::...
  Rat   297 VIEFSLCLLFAKLVSYTFLYWLPLYIFN-VAH---FSAKEAG--------DLSTLFDVGGIIGGI 349

  Fly   387 LRKNGILST-TNVRKLFNCGGFGMEG-LFFL--FVAHSSTATGAMFALTCGVAFSG------FAI 441
            :.  |::|. ||.|....|....:.. :.||  ::..:...:..:..:.|||..:|      .|:
  Rat   350 MA--GLISDYTNGRATTCCVMLILAAPMMFLYNYIGQNGITSSIVMLIICGVLVNGPYALITTAV 412

  Fly   442 SGYNVNHLDIA--PRYASILMGLSNGIGTLAGIIVPYALDGLIQANPTGCWTTVFTLAACVHLVG 504
            |.....|..:.  .:..|.:..:.:|.|::...:.| .|.|||  :||| |..||.:.....::.
  Rat   413 SADLGTHESLKGNAKALSTVTAIIDGTGSIGAALGP-LLAGLI--SPTG-WNNVFYMLISADILA 473

  Fly   505 CTFYGIFASGELQPW 519
            |.........|:..|
  Rat   474 CLLLCRLVYKEILAW 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_001245848.1 MFS 98..512 CDD:119392 88/461 (19%)
MFS_1 101..475 CDD:284993 76/424 (18%)
Slc37a2NP_001178923.1 2A0104 77..463 CDD:273319 80/420 (19%)
MFS 86..481 CDD:119392 83/429 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342622
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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