DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGlut and slc17a6a

DIOPT Version :9

Sequence 1:NP_001245848.1 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_001009982.1 Gene:slc17a6a / 494492 ZFINID:ZDB-GENE-050105-4 Length:587 Species:Danio rerio


Alignment Length:615 Identity:275/615 - (44%)
Similarity:359/615 - (58%) Gaps:73/615 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 GYEEMEGGDREGRGPGGGHAYDDDDDRPDSPASFEEIERPPLRKIDKYCKAECPC--MPARYTIA 99
            |.|:|.  :..|:..|..|...:...:........|..||......|....:|.|  :|.||.||
Zfish    12 GKEKMR--NLAGKTLGHMHRVMERKQKTGEVIELTEDGRPMHMPEKKAPLVDCTCFGLPRRYIIA 74

  Fly   100 TMACVGFMIAFGMRCNMSAAKLKGEHNGTVF------------MNWTVAVESHVDSSFFWGYLVT 152
            .|:.:||.|:||:|||:..|.:...:|.|:.            .||.......:..||||||.||
Zfish    75 IMSGLGFCISFGIRCNLGVAIVDMVNNSTIHKGGKIIIKGKAKFNWDPETVGMIHGSFFWGYTVT 139

  Fly   153 QIPGGFIASKFPANKIFGLSIVSSATLHLFVPFAMTLMHGHVVICVRVLQGLFEGVTYPACHGIW 217
            |||||:|:|:..||::||.:|:.::||::|:|.|..:.:| .|:.||:||||.||||||||||||
Zfish   140 QIPGGYISSRLAANRVFGAAILLTSTLNMFIPSAARVHYG-CVMFVRILQGLVEGVTYPACHGIW 203

  Fly   218 RFWAPPMERSRLATLAFSGSYAGVVVGLPLSGLLADAVGYQAPFYAYGVFGIIWYMFWIWLCFEN 282
            ..||||:|||||||.:|.|||||.||.:||:|:|....|:.:.||.||.|||:||||||.:.:|:
Zfish   204 SKWAPPLERSRLATTSFCGSYAGAVVAMPLAGILVQYSGWSSVFYIYGSFGIVWYMFWILVSYES 268

  Fly   283 PRKHPAISIPELKYIEKSLGESAH--PTMPSLKTTPWREMMRSMPVYAIIVANFCRSWNFYLLVL 345
            |..||.|:..|..|||:|:||||.  ..|...| ||||:...||||||||||||||||.||||::
Zfish   269 PADHPTITDEERTYIEESIGESAKLLGAMEKYK-TPWRKFFTSMPVYAIIVANFCRSWTFYLLLI 332

  Fly   346 FQSSFLKHKFGFKVEEAGFVGSLPHLIMTTIVPFGGMLADHLRKNGILSTTNVRKLFNCGGFGME 410
            .|.::.:..|||::.:.|.|.:||||:||.|||.||.|||:||...||:||.|||:.||||||||
Zfish   333 SQPAYFEEVFGFEISKVGMVSALPHLVMTIIVPIGGQLADYLRSKNILTTTTVRKIMNCGGFGME 397

  Fly   411 GLFFLFVAHSSTATGAMFALTCGVAFSGFAISGYNVNHLDIAPRYASILMGLSNGIGTLAGIIVP 475
            ....|.|..|.:...|:..|...|.||||||||:|||||||||||||||||:|||:|||:|::.|
Zfish   398 ATLLLVVGFSHSKGVAISFLVLAVGFSGFAISGFNVNHLDIAPRYASILMGISNGVGTLSGMVCP 462

  Fly   476 YALDGLIQANPTGCWTTVFTLAACVHLVGCTFYGIFASGELQPWAEPPAEEQKVWAPPPGAITNT 540
            ..:..:.:......|..||.:|:.||..|..|||||||||.||||:|  ||             |
Zfish   463 LIVGAMTKNKTREEWQNVFLIASLVHYGGVIFYGIFASGEKQPWADP--EE-------------T 512

  Fly   541 DPSQAGML---------GD-------YMKETSFGAPEYTEQSQMQQSTAISYGATGHVANNPFAM 589
            ...:.|.:         ||       :..:.:.|||            |.:||||..: |..:|.
Zfish   513 SDEKCGFIDEDELAEETGDITLSHAPFGAQGALGAP------------AKTYGATTQL-NGGWAK 564

  Fly   590 A-SGAPPIAEEDAPPTY-GDVTNPGQYGYT 617
            . .......:|||..|| ||       ||:
Zfish   565 GWEKTEEFIQEDAERTYTGD-------GYS 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_001245848.1 MFS 98..512 CDD:119392 225/427 (53%)
MFS_1 101..475 CDD:284993 211/387 (55%)
slc17a6aNP_001009982.1 2A0114euk 70..512 CDD:129972 239/458 (52%)
MFS 75..499 CDD:119392 223/425 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582643
Domainoid 1 1.000 435 1.000 Domainoid score I549
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H121617
Inparanoid 1 1.050 501 1.000 Inparanoid score I1329
OMA 1 1.010 - - QHG53923
OrthoDB 1 1.010 - - D144672at33208
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 1 1.000 - - otm26323
orthoMCL 1 0.900 - - OOG6_100421
Panther 1 1.100 - - O PTHR11662
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X201
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.910

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