DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGlut and slc17a9b

DIOPT Version :9

Sequence 1:NP_001245848.1 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_001002635.1 Gene:slc17a9b / 436908 ZFINID:ZDB-GENE-040718-380 Length:465 Species:Danio rerio


Alignment Length:393 Identity:116/393 - (29%)
Similarity:183/393 - (46%) Gaps:38/393 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 NWTVAVESHVDSSFFWGYLVTQIPGGFIASKFPANKIFGLSIVSSATLHLFVP----------FA 186
            :|:......|..||||||..||:.||:::.:....|:..||..:...:..|.|          |:
Zfish    80 SWSKRETGMVLGSFFWGYCFTQVLGGYVSDRVGGEKVMLLSAAAWGAMTAFTPILAHFCSQPIFS 144

  Fly   187 MTLMHGHVVICVRVLQGLFEGVTYPACHGIWRFWAPPMERSRLATLAFSGSYAGVVVGLPLSGLL 251
            |||.        |.|.||.:||.||:...:........||..|.:...||||.|.:|...:..|:
Zfish   145 MTLS--------RFLMGLLQGVHYPSLASLCSQKVVESERGFLMSTVGSGSYLGTLVIGGVGSLM 201

  Fly   252 ADAVGYQAPFYAYGVFGIIW-YMFWIWLCFENPRKHPAISIPELKYIEKSLGESAHPTMPSLKTT 315
            .|..|:::.||..|:..::| |..|.:|.   ..:.|.|::       :|||.:.  |...:...
Zfish   202 LDLYGWESVFYVSGLLSVLWAYCMWKYLL---KGEGPIITL-------ESLGSAG--TQSKIPKR 254

  Fly   316 PWREMMRSMPVYAIIVANFCRSWNFYLLVLFQSSFLKHKFGFKVEEAGFV-GSLPHLIMTTIVPF 379
            .|..:.|...|.|:|:.:.|.:..|:.|:.:..:|.|..|   .:..|:| ..:|..:......|
Zfish   255 NWLRLFRQPAVCAVIITHLCTASTFFTLLSWLPTFFKDTF---PDAKGWVFNVIPWFVAIPSSLF 316

  Fly   380 GGMLADHLRKNGILSTTNVRKLFNCGGFGMEGLFFLFVAHSSTATGAMFALTCGVAFSGFAISGY 444
            .|.|:|||...| ..|.:||||......|:..:|.||:..::|...|:..::..:..:.|:.||.
Zfish   317 SGCLSDHLISQG-FDTASVRKLMQFFSMGVSSVFTLFLCGTTTFPAAVAFVSATMGLTTFSHSGV 380

  Fly   445 NVNHLDIAPRYASILMGLSNGIGTLAGIIVPYALDGLIQANPTGCWTTVFTLAACVHLVGCTFYG 509
            :||..|:||..|..|.|:.|..|...|:|:.|....||:.  ||.|.:||.|...|:|:|.|.:.
Zfish   381 SVNVQDLAPSCAGALFGVMNTCGAFTGVIMVYFSGYLIET--TGSWASVFGLITVVNLLGLTTFL 443

  Fly   510 IFA 512
            .||
Zfish   444 SFA 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_001245848.1 MFS 98..512 CDD:119392 114/391 (29%)
MFS_1 101..475 CDD:284993 101/354 (29%)
slc17a9bNP_001002635.1 MFS 51..446 CDD:119392 114/391 (29%)
MFS_1 54..409 CDD:284993 100/352 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53923
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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