DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGlut and slc37a4a

DIOPT Version :9

Sequence 1:NP_001245848.1 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_999903.1 Gene:slc37a4a / 406465 ZFINID:ZDB-GENE-040426-2230 Length:429 Species:Danio rerio


Alignment Length:453 Identity:103/453 - (22%)
Similarity:178/453 - (39%) Gaps:86/453 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 RYTIATMACVGFMIAFGMRCNMSAAKLKGEHNGTVFMNWTVAVESHVD--------SSFFWGYLV 151
            |.||.....||:.:.:..|...|            |:..:|..|..:|        ||....|.:
Zfish    10 RATIFLAMFVGYTLYYFNRKTFS------------FVMPSVMQEITLDKDDLGLITSSQSLAYAI 62

  Fly   152 TQIPGGFIASKFPANKIFGLSIVSSATLHLFVPFAMTLMHGHVVICVRVLQGLFEGVTYPACHGI 216
            ::...|.::.:..|..:|.:.:.:...:::....:.::.   |...:..|.||.:|:.:|.|..:
Zfish    63 SKFISGVLSDQMSARWLFSIGLFTVGGINVIFSQSSSVA---VFSGLWFLNGLGQGLGWPPCAKV 124

  Fly   217 WRFWAPPME-RSRLATLAFSGSYAGVVVGLPLSGLLADAVGYQAPFYAYGVFGIIWYMFWIWLCF 280
            .|.|..|.: .:..|.|:.|.:.|| .:|..::.|:|.:..:::.....|:..::..:|    |.
Zfish   125 LRKWFEPSQFGTWWAVLSCSMNLAG-CLGPIIATLMAQSYSWRSTLSISGLTCVVTSIF----CL 184

  Fly   281 ENPRKHPA-ISIPELKY-IEKSLGESA--HPTMPSLKTTP--WREMMRSMPVYAIIVANFCRSWN 339
            ...|..|: :.:|.::. .:|..|.|:  ..|......:|  |...:..:.|:.:..|  ...|.
Zfish   185 IIIRNEPSEVGLPNIEAGAKKGKGGSSKNESTFKEFIFSPYLWLMSLGYLVVFGVKTA--YTDWG 247

  Fly   340 FYLLV--LFQSSFLKHKFGFKVEEAGFVGSLPHLIMTTIVPFGGMLADH-LRKNGILSTTNVRK- 400
            ...|:  ..||:.:...|...:|..|.:|||.          .|.|:|. :.|:|:....|.|. 
Zfish   248 QLFLIQDKGQSALMGSSFMSALEIGGLLGSLA----------AGFLSDRAVAKHGLRLYGNPRHG 302

  Fly   401 LFNCGGFGMEGLFFLF----VAHSSTATGAMFALTCGVAFSGFAISG----YNVNHLDIAPRYAS 457
            |......||....:||    .||||.    ::.|..|.|| ||:..|    :.|...:.||    
Zfish   303 LLLSMMAGMCVSMYLFRTTVTAHSSN----VWILLLGAAF-GFSSYGPIALFGVLANESAP---- 358

  Fly   458 ILMGLSNGIGTLAGIIVPYA-LDGLIQANPTGC------WTTVFTLA--ACVHLVGCTFYGIF 511
                 ||..||...|:...| :.|.:...|.|.      |.|.|.:|  ||:    .|..|.|
Zfish   359 -----SNYCGTSHAIVALMANVGGFLSGLPFGTVAKHHGWNTAFWVAEIACM----VTTVGYF 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_001245848.1 MFS 98..512 CDD:119392 101/450 (22%)
MFS_1 101..475 CDD:284993 87/400 (22%)
slc37a4aNP_999903.1 MFS 14..415 CDD:119392 100/449 (22%)
2A0104 18..397 CDD:273319 93/424 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582641
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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