DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGlut and slc37a4b

DIOPT Version :9

Sequence 1:NP_001245848.1 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_001315024.1 Gene:slc37a4b / 393914 ZFINID:ZDB-GENE-040426-827 Length:453 Species:Danio rerio


Alignment Length:479 Identity:95/479 - (19%)
Similarity:171/479 - (35%) Gaps:134/479 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 VGFMI--------AFGMRCNMSAAKLKGEHNGTVFMNWTVAVESHVDSSFFWGYLVTQIPGGFIA 160
            ||:|:        :|.|...|...:|..|..|.:..:.|:|            |.:::...|.::
Zfish    19 VGYMLYYFNRKTFSFLMPSVMEEIELDKEELGLITSSQTLA------------YAISKFISGVLS 71

  Fly   161 SKFPANKIFGLSIVSSATLHLFVPFAMTLMHGHVVICVRVLQGLFEGVTYPACHGIWRFWAPPME 225
            .:..|..:|.:.:....|:::....:.|:|   :...:..:.|..:|..:|.|..:.|.|..|  
Zfish    72 DRISARWLFSIGLFIVGTINIAFSCSSTVM---LFTVLWFVNGFGQGFGWPPCGKVLRKWFEP-- 131

  Fly   226 RSRLAT--------LAFSGSYAGVV-----------VGLPLSGLLADAVGYQAPFYAYGVFGIIW 271
             |:..|        :..:||...::           |.:.:|||:..||..              
Zfish   132 -SQFGTWWAILCCSMNLAGSLGPIITTVLVQYYDWRVIMSVSGLICMAVAV-------------- 181

  Fly   272 YMFWIWLCFENPRKHPA-ISIPELK-YIEKSLGESAHPT-MPSLK---TTPWREMMRS--MPVYA 328
                  :|....:..|: :.:|.:: ..:|..|:...|. ..|||   .:|:..::.:  :.|:.
Zfish   182 ------VCLLMVKNEPSDVGLPSIQPGAKKGKGKKGGPNDESSLKDFLLSPYLWVLSAGYLVVFG 240

  Fly   329 IIVANFCRSWN--FYLLVLFQSSFLKHKFGFKVEEAGFVGSLPHLIMTTIVPFGGMLADH-LRKN 390
            :.:|  |..|.  |.:....||:.:...:...:|..||.||:.          .|.|:|. :.:.
Zfish   241 VKIA--CTDWGQLFLMQEKGQSAMMGSSYMSALEVGGFFGSIG----------AGYLSDRAVARQ 293

  Fly   391 GILSTTNVRK---LFNCGGFGM---------------EGLFFLFVAHS-STATGA----MFALTC 432
            |:....|.|.   |....|..:               |...::...|. |..||.    ::.|..
Zfish   294 GLGVYGNPRHGLLLMMMAGMAVSMYLFRVTITPETPEEAPLWVLALHPVSVLTGVSEKELWILIL 358

  Fly   433 GVAFSGFAISG----YNVNHLDIAPRYASILMGLSNGIGTLAGIIVPYA-LDGLIQANPTG---- 488
            |.|| ||:..|    :.|...:.||         ||..||...|:...| :...|...|..    
Zfish   359 GAAF-GFSSYGPIALFGVIASESAP---------SNFCGTSHAIVALMANVGAFIAGLPFSTIAK 413

  Fly   489 --CWTTVFTLA--ACVHLVGCTFY 508
              .|.|.|.:|  :|.....|.|:
Zfish   414 RYSWDTAFWVAEVSCAITTVCFFF 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_001245848.1 MFS 98..512 CDD:119392 95/479 (20%)
MFS_1 101..475 CDD:284993 85/435 (20%)
slc37a4bNP_001315024.1 UhpC 18..421 CDD:332119 90/461 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582639
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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