DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGlut and Slc17a5

DIOPT Version :9

Sequence 1:NP_001245848.1 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_001009713.1 Gene:Slc17a5 / 363103 RGDID:1311388 Length:495 Species:Rattus norvegicus


Alignment Length:503 Identity:179/503 - (35%)
Similarity:268/503 - (53%) Gaps:53/503 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 RGPGGGHAYDDDDDRPDSPASFEEIERPPLRKIDKYCKAECPCMPARYTIATMACVGFMIAFGMR 113
            |||.|    :||::..||         .||....:..:|...|..|||.:|.:|..||.:.:.:|
  Rat     6 RGPAG----NDDEESSDS---------TPLLPSARQIEAAPACCSARYNLALLAFCGFFVLYALR 57

  Fly   114 CNMSAA---------------------------KLKGEHNGTVFMNWTVAVESHVDSSFFWGYLV 151
            .|:|.|                           |:...|.|..: .|....:..:..|||:||:|
  Rat    58 VNLSVALVDMVDSNSTLTDNRTSKECAEHSAPVKVHHNHTGKKY-QWDAETQGWILGSFFYGYIV 121

  Fly   152 TQIPGGFIASKFPANKIFGLSIVSSATLHLFVPFAMTLMHGHV-VICVRVLQGLFEGVTYPACHG 215
            ||||||::||:.....:.||.|:.:|...||.|.|..|  |.| :|.:|.|:||.||||:||.|.
  Rat   122 TQIPGGYMASRIGGKLLLGLGILGTAVFTLFTPLAADL--GVVALIVLRALEGLGEGVTFPAMHA 184

  Fly   216 IWRFWAPPMERSRLATLAFSGSYAGVVVGLPLSGLLADAVGYQAPFYAYGVFGIIWYMFWIWLCF 280
            :|..||||:|||:|.|::::|:..|.|:.|||||::...:.:...||.:|:.||:|::.|:|:..
  Rat   185 MWSSWAPPLERSKLLTISYAGAQLGTVISLPLSGIICYYMNWTYVFYLFGLVGIVWFILWMWIVS 249

  Fly   281 ENPRKHPAISIPELKYIEKSLGESAHPTMPSLKTTPWREMMRSMPVYAIIVANFCRSWNFYLLVL 345
            :.|..|..||..|.:||..||...    :.|.|..||..:::|:|::||:||:|..:|.||.|:.
  Rat   250 DTPETHKTISHYEKEYIVSSLKNQ----LSSQKVVPWVSILKSLPLWAIVVAHFSYNWTFYTLLT 310

  Fly   346 FQSSFLKHKFGFKVEEAGFVGSLPHLIMTTIVPFGGMLADHLRKNGILSTTNVRKLFNCGGFGME 410
            ...:::|....|.|:|.||:.:||:......:...|..||:||.....||.:||::|:.  .||.
  Rat   311 LLPTYMKEILRFNVQENGFLSALPYFGCWLCMIVCGQAADYLRVKWNFSTISVRRIFSL--IGMV 373

  Fly   411 GLFFLFVAHSSTATG---AMFALTCGVAFSGFAISGYNVNHLDIAPRYASILMGLSNGIGTLAGI 472
            |.....||.......   |:..||......|||.||:::|||||||.||.||:|::|...|:.|:
  Rat   374 GPAVFLVAAGFIGCDYSLAVAFLTISTTLGGFASSGFSINHLDIAPSYAGILLGITNTFATIPGM 438

  Fly   473 IVPYALDGLIQANPTGCWTTVFTLAACVHLVGCTFYGIFASGELQPWA 520
            |.|.....|...|....|.|||.:||.:::.|..|:.:||.||:|.||
  Rat   439 IGPIIAKSLTPDNTIKEWQTVFCIAAAINVFGAIFFTLFAKGEVQNWA 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_001245848.1 MFS 98..512 CDD:119392 157/444 (35%)
MFS_1 101..475 CDD:284993 145/404 (36%)
Slc17a5NP_001009713.1 2A0114euk 30..491 CDD:129972 169/466 (36%)
MFS 99..478 CDD:119392 146/387 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342495
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53923
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100421
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X201
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.750

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