DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment VGlut and MFS10

DIOPT Version :9

Sequence 1:NP_001245848.1 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_001285188.1 Gene:MFS10 / 32263 FlyBaseID:FBgn0030452 Length:559 Species:Drosophila melanogaster


Alignment Length:537 Identity:151/537 - (28%)
Similarity:250/537 - (46%) Gaps:93/537 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 DDDRPDSPASFEEIERPPLRKIDKYCKAECPCMP-ARYTIATMACVGFMIAFGMRCNMSAAKL-- 121
            ||:..|...:|...|||.:|. ....:....|.| .|:....|..:||.:.:.||.|:|.|.:  
  Fly    33 DDEADDEREAFCSGERPLIRS-SGAAEENHGCGPKTRHIFGFMGFLGFAVVYAMRVNLSVAIVAM 96

  Fly   122 ----------------------KGEHNGT--------VFMNWTVAVESHVDSSFFWGYLVTQIPG 156
                                  ...|||:        .|: |..|.:..|..|||:||::||:||
  Fly    97 VNQTAIPHSNSSVIDTDTCPLPAPHHNGSDPNPQKEGEFV-WDEATQGLVLGSFFYGYVLTQVPG 160

  Fly   157 GFIASKFPANKIFGLSIVSSATLHLFVPFAMTLMHGH----VVICVRVLQGLFEGVTYPACHGIW 217
            |.:|..:...||:|..::.:|...|..|.|     .|    :::.||:|:|:.|||||||.|.:.
  Fly   161 GRMAELYGGKKIYGYGVLITAVFTLITPLA-----AHWDLPLLVLVRILEGMGEGVTYPAMHAML 220

  Fly   218 RFWAPPMERSRLATLAFSGSYAGVVVGLPLSGLLAD---AVGYQAPFYAYGVFGIIWYMFWIWLC 279
            ..|.||:||::.|.:.::||..|.|:.:||:|.|..   ..|:.:.||.:|:.||:|::.|::|.
  Fly   221 AHWIPPLERNKFAAIVYAGSNIGTVISMPLAGWLCSLDFLGGWPSAFYIFGLLGILWFIAWMYLV 285

  Fly   280 FENPRKHPAISIPELKYIEKSL-----------------GES-----AHPTMPSLKTTPWREMMR 322
            ::.|..||.||..|.:|||:||                 |:.     |.|..|    .||..::.
  Fly   286 YDKPSDHPRISESEREYIERSLQVQRLINQDLAEAEEEEGQDEVSLRAPPEEP----IPWSSLLT 346

  Fly   323 SMPVYAIIVANFCRSWNFYLLVLFQSSFLKHKFGFKVEEAGFVGSLPHLIMTTIVPFGGMLADHL 387
            |:|::||::....:.|.||..:....:::.:...|.::....:.::|:|....:......|||.:
  Fly   347 SVPLWAILLTQCGQGWAFYTQLTELPTYMSNILHFDIQSNALLNAVPYLTSWFVGIACSALADWM 411

  Fly   388 RKNGILSTTNVRKLFN-----CGGFGMEGLFF-----LFVAHSSTATGAMFALTCGVAFSGFAIS 442
            .....:|..|..||:|     ....|:.|:.:     ::|.......|         :|.|...:
  Fly   412 LARRYISLLNSYKLWNTVASVVPSLGLIGIIYVGCDWVWVTFMLAGVG---------SFGGAVYA 467

  Fly   443 GYNVNHLDIAPRYASILMGLSNGIGTLAGIIVPYALDGLIQANPT-GCWTTVFTLAACVHLVGCT 506
            |..:||:.::||||..:.|::|....:.|.:.||.:..:|....| ..|..||.|||.:::.|..
  Fly   468 GNQMNHIALSPRYAGTMYGITNSAANICGFLAPYVIGLIINHRETLTQWHLVFWLAAGLNIAGNF 532

  Fly   507 FYGIFASGELQPWAEPP 523
            .|.||||.|.|.|::.|
  Fly   533 IYLIFASAEEQSWSKTP 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_001245848.1 MFS 98..512 CDD:119392 133/485 (27%)
MFS_1 101..475 CDD:284993 120/444 (27%)
MFS10NP_001285188.1 2A0114euk 63..547 CDD:129972 142/502 (28%)
MFS 134..538 CDD:119392 122/422 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 116 1.000 Domainoid score I288
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 134 1.000 Inparanoid score I245
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 1 1.000 - - mtm14983
orthoMCL 1 0.900 - - OOG6_100421
Panther 1 1.100 - - P PTHR11662
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
76.960

Return to query results.
Submit another query.