DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGlut and CG6978

DIOPT Version :9

Sequence 1:NP_001245848.1 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_572188.1 Gene:CG6978 / 31413 FlyBaseID:FBgn0029727 Length:479 Species:Drosophila melanogaster


Alignment Length:488 Identity:152/488 - (31%)
Similarity:241/488 - (49%) Gaps:55/488 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 DDDDRPDSPASFEEIERPPLRKIDKYCKAECPCMPARYTIATMACVGFMIAFGMRCNMSAAKL-- 121
            |.:.|.:..||..:|.|               |...|:.:..|...|...|:.||.|||.|.:  
  Fly    20 DQEVRMERYASDGQIPR---------------CRKTRFFVVLMLFSGMANAYVMRTNMSVAIVAM 69

  Fly   122 --------------KGEHNGTVFMNWTVAVESHVDSSFFWGYLVTQIPGGFIASKFPANKIFGLS 172
                          ..|.:|.  ..|:..::.::.||||:||::||||.|.:...:.|....|..
  Fly    70 VNHTAISHTKSSTQSKERDGD--FEWSYKLQGYILSSFFYGYVITQIPFGLMIKYYGARHFLGWG 132

  Fly   173 IVSSATLHLFVPFAMTLMHGHVV-IC-VRVLQGLFEGVTYPACHGIWRFWAPPMERSRLATLAFS 235
            ::.::....|:|  ::...|.|| :| ||.:|||.||...|..|.:...|.||.|||......::
  Fly   133 MMINSLAAFFIP--ISARSGGVVGLCVVRFIQGLGEGPIVPCSHSLLAQWVPPNERSLAGAAVYA 195

  Fly   236 GSYAGVVVGLPLSGLLA----DAVGYQAPFYAYGVFGIIWYMFWIWLCFENPRKHPAISIPELKY 296
            |:..|.:|.:|||||||    |. |:.:.||.:|:|..||.:.:|.|..|:|.....||..|.::
  Fly   196 GAQFGTIVSMPLSGLLAHYGFDG-GWPSIFYIFGLFSTIWCIIFICLVQESPAVSTRISEAERRH 259

  Fly   297 IEKSLGESAHPTMPSLKTTPWREMMRSMPVYAIIVANFCRSWNFYLLVLFQSSFLKHKFGFKVEE 361
            |.:::.: |.|...|  ..|:..:.:|.|.|||:||:...::.:..|:....:::.......:..
  Fly   260 IMEAIWQ-AQPEERS--RIPFLGIAKSPPFYAILVAHAGHNYGYETLMTMLPTYMYRVLNVNIRT 321

  Fly   362 AGFVGSLPHLIMTTIVPFGGMLADHL-RKNGILSTTNVRKLFN-CGGFG--MEGLFFLFVAHSST 422
            .|.:.|||:|.|..:....|:|||.| |:|  .|.|.||||.| .|.:|  :..:...||.||..
  Fly   322 NGIISSLPYLAMWILAIVFGILADCLIRRN--FSITVVRKLMNSLGQYGPAVALISVGFVHHSLW 384

  Fly   423 ATGAMFALTCGVAFSGFAISGYNVNHLDIAPRYASILMGLSNGIGTLAGIIVPYALDGLIQANPT 487
            .|..:|.|  |:..:|....|:.:||||::||:|.:|:.::|.:..|.|::.|.....:|...|:
  Fly   385 LTSVIFIL--GMGLNGAIYCGFKINHLDLSPRFAGLLISVTNCVANLVGLMAPMVAGHVIDPKPS 447

  Fly   488 -GCWTTVFTLAACVHLVGCTFYGIFASGELQPW 519
             ..|..||.:||.|.:...:||.:||||: |.|
  Fly   448 VENWRIVFYIAAGVFIFTASFYNVFASGK-QQW 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_001245848.1 MFS 98..512 CDD:119392 138/440 (31%)
MFS_1 101..475 CDD:284993 127/399 (32%)
CG6978NP_572188.1 2A0114euk 38..478 CDD:129972 143/452 (32%)
MFS 45..473 CDD:119392 138/439 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452014
Domainoid 1 1.000 116 1.000 Domainoid score I288
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 134 1.000 Inparanoid score I245
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D497052at2759
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 1 1.000 - - mtm14983
orthoMCL 1 0.900 - - OOG6_100421
Panther 1 1.100 - - P PTHR11662
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
98.900

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