DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGlut and Slc37a3

DIOPT Version :9

Sequence 1:NP_001245848.1 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_001101324.2 Gene:Slc37a3 / 312255 RGDID:1310346 Length:494 Species:Rattus norvegicus


Alignment Length:491 Identity:92/491 - (18%)
Similarity:165/491 - (33%) Gaps:159/491 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 AFGMRCNMSAAKLKGEH------NGTVFMNWTVAVESHVDSSFFWGYLVTQIPGGFIASKFPANK 167
            ||....::.|......|      :.|:|:       ..:|:.|.:.|.|.....|.|..:.....
  Rat    56 AFNTSIDLPAEIWSSNHLFPSTEDATLFL-------GTLDTVFLFSYAVGLFISGIIGDRLNLRW 113

  Fly   168 IFGLSIVSSATLHLFVPFAM-TL-----MHGHVVIC-VRVLQGLFEGVTYPACHGIWRFWAPPME 225
            :....:.|||    ||.|.. ||     .:.....| :.::.||.:...:|....:...|     
  Rat   114 VLSFGMCSSA----FVVFVFGTLTEWLHFYNKWFYCGLWIVNGLLQSTGWPCVVAVMGNW----- 169

  Fly   226 RSRLATLAFSGSYAGVVVGL---------PLSGLLADAV---GYQAPF-------YAYGV---FG 268
                    |..:..|||.||         .|...||.:|   ||:..|       :|.|:   ||
  Rat   170 --------FGKAGRGVVFGLWSACASVGNILGACLASSVLQYGYEYAFLVTASVQFAGGIVIFFG 226

  Fly   269 IIWYMFWIWLCFENPRKHPAISIPELKYIEKSLGESAHPTM----------PSLKTTPWREMMRS 323
            ::          .:|.:   |.:|.::....|..:|..|.:          |:......|.:::.
  Rat   227 LL----------VSPEE---IGLPSIEAEAGSEEDSQRPLINGAENEDDYEPNYSIQEDRAVIQV 278

  Fly   324 MPV-------------YAIIVANFCR---SWNFYLLVLFQSSFLKHKFGFKVEEA---------- 362
            ..:             |::..|  |.   :::|:..:.|   :|.:.||:|..||          
  Rat   279 KAISFHQACCLPGVIPYSLAYA--CLKLVNYSFFFWLPF---YLSNNFGWKEAEADKLSIWYDVG 338

  Fly   363 GFVGSLPHLIMTTIVPFGGMLADHLRKNG-ILSTTNVRKLFNCGGFGMEGLFFLFVAHSSTATGA 426
            |.:|.          ...|.::|.|:|.. :|:.:....:.:..|:...       .::.:....
  Rat   339 GIIGG----------TLQGFISDVLQKRAPVLALSLFLAVGSLVGYSRS-------PNNKSVNAL 386

  Fly   427 MFALTCGVAFSGFAISG-----YNVNHLDIAPRYASILMGLSNGIGTLAGII---------VPYA 477
            :..:|      ||.|.|     .:....|:..:  .::.|.|..:.|:.||:         |...
  Rat   387 LMTIT------GFFIGGPSNMVSSAISADLGRQ--ELIQGSSEALATVTGIVDGTGSIGAAVGQY 443

  Fly   478 LDGLIQANPTGCWTTVFTLAACVHLVGCTFYGIFAS 513
            |..|||.|....|...|.:.    :..||.  :|.|
  Rat   444 LVSLIQDNLGWMWVFYFFIL----MTSCTI--LFIS 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_001245848.1 MFS 98..512 CDD:119392 90/488 (18%)
MFS_1 101..475 CDD:284993 80/451 (18%)
Slc37a3NP_001101324.2 MFS_SLC37A3 20..476 CDD:340900 92/491 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342624
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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