DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGlut and Slc17a2

DIOPT Version :9

Sequence 1:NP_001245848.1 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:XP_038951630.1 Gene:Slc17a2 / 306950 RGDID:1308821 Length:487 Species:Rattus norvegicus


Alignment Length:394 Identity:133/394 - (33%)
Similarity:214/394 - (54%) Gaps:13/394 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 WTVAVESHVDSSFFWGYLVTQIPGGFIASKFPANKIFGLSIVSSATLHLFVPFAMTLMHGHV-VI 196
            |:...:..:.||..:|.::|.||.|::|..|.|.:|.|..::.|:.|.||.|.|...  |.: ||
  Rat    95 WSTETQGIIFSSISYGIILTLIPSGYLAGIFGAKQILGAGLLISSLLTLFTPLAADF--GVILVI 157

  Fly   197 CVRVLQGLFEGVTYPACHGIWRFWAPPMERSRLATLAFSGSYAGVVVGLPLSGLLADAVGYQAPF 261
            .:|.:||:.:|:::.....||..||||:|||:|.::|.||:..|..:.|.:.||::.|:|:...|
  Rat   158 VIRTVQGMAQGMSWTGQFTIWAKWAPPLERSKLTSIAGSGAAFGSFIILCVGGLISQALGWPFIF 222

  Fly   262 YAYGVFGIIWYMFWIWLCFENPRKHPAISIPELKYIEKSLG-ESAHPTMPSLKTTPWREMMRSMP 325
            |.:|..|.:..:.|..:.:::|..||.||:.|.:||..|:. :|:.|.    ::.|.:.|:|.:|
  Rat   223 YIFGSIGCVCCVLWFTMIYDDPMHHPCISVKEKEYITSSVAQQSSSPR----RSIPIKAMVRCLP 283

  Fly   326 VYAIIVANFCRSWNFYLLVLFQSSFLKHKFGFKVEEAGFVGSLPHLIMTTIVPFGGMLADHLRKN 390
            ::||.:..|...|...:::.:..:::.......:.::|.:.|||.:..::....||.:||.|...
  Rat   284 LWAIFMGFFSHFWLCTIIITYLPTYISTVLHVNIRDSGVLSSLPFIAASSCTILGGQMADFLLSR 348

  Fly   391 GILSTTNVRKLFNCGGFGMEGLFFL---FVAHSSTATGAMFALTCGVAFSGFAISGYNVNHLDIA 452
            .:||...|||||:..|..:..|..:   ||..|..||..:..|..|.  |....||:.:|.||:|
  Rat   349 NLLSLITVRKLFSSLGLLLPSLCAVALPFVTSSYIATIVLLILIPGT--SNLCDSGFIINTLDVA 411

  Fly   453 PRYASILMGLSNGIGTLAGIIVPYALDGLIQANPTGCWTTVFTLAACVHLVGCTFYGIFASGELQ 517
            |||||.|||:|.|.|..||||.......||..:....|..||.|:|.|::.|..||.||...|:|
  Rat   412 PRYASFLMGISRGFGLTAGIISSTTTGFLISQDSESGWRNVFFLSAAVNMFGLIFYLIFGQAEIQ 476

  Fly   518 PWAE 521
            .||:
  Rat   477 NWAK 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_001245848.1 MFS 98..512 CDD:119392 128/383 (33%)
MFS_1 101..475 CDD:284993 116/346 (34%)
Slc17a2XP_038951630.1 MFS_SLC17 30..471 CDD:340876 128/383 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342615
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D497052at2759
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.850

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