DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGlut and Slc37a1

DIOPT Version :9

Sequence 1:NP_001245848.1 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_001011944.1 Gene:Slc37a1 / 294321 RGDID:1308587 Length:537 Species:Rattus norvegicus


Alignment Length:455 Identity:103/455 - (22%)
Similarity:162/455 - (35%) Gaps:142/455 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 VDSSFFWGYLVTQIPGGFIASKFPAN--KIFGLSIVSSATLHLFVPFAMTLMH--GHVVICVRVL 201
            :|.:|...|.:.....|.|..:.|..  ..||: :.|.|...||.......:|  |..|: .:::
  Rat   106 LDYAFLCAYAIGMYLSGIIGERLPIRYYLTFGM-LASGAFTALFGLGYFYNIHSLGFYVV-TQII 168

  Fly   202 QGLFEGVTYPACHGIWRFWAPPMERSRLATLAFSGSYAGVVVGLPLSGLLAD---AVGYQAPFYA 263
            .||.:...:|:.......|.....|..:..:..|.:..|.::|..::|....   .:.:..|...
  Rat   169 NGLVQTTGWPSVVTCLSNWFGKGRRGLIMGIWNSHTSVGNILGSLIAGYWVSTCWGLSFIVPGAI 233

  Fly   264 YGVFGIIWYMFWIWLCFENPR---------KHPAIS----------------------IPELKYI 297
            .|..||:.::|.|    |:|:         .||..|                      .|||:.:
  Rat   234 VGAMGIVCFLFLI----EHPKDIKCSSTLPTHPRASENGINRFRVQKQTTHSEKNGPLDPELQCL 294

  Fly   298 EKSLGES-AHPT----MPSLKTTPWR--EMMRSMPVYAIIVANFCRSWNFYLLVLFQSSFLKHKF 355
            ..|.|:| .||:    :|..:|:...  ....::.:..:|        .|.|.:||.        
  Rat   295 LLSDGKSPLHPSHIVVLPGDRTSSMAAISFTGALRIPGVI--------EFSLCLLFA-------- 343

  Fly   356 GFKVEEAGFVGSLPHLIMTTIVPFGGMLADHL--RKNGILSTTNVRKLFNCGG-FG--------- 408
              |:....|:..|| |.:|.:        |||  :|.|.|||     ||:.|| ||         
  Rat   344 --KLVSYTFLFWLP-LYITNV--------DHLDAKKAGELST-----LFDVGGIFGGILAGVISD 392

  Fly   409 -ME------GLFFLFVA-----HSSTATGAMFALTCGVAFSGFAISGYNVNHLDIAPRYASI--- 458
             :|      ||..|..|     .||.:...:.|....:..||..:||          .||.|   
  Rat   393 RLEKRASTCGLMLLLAAPTLYVFSSVSKMGLEATIAMLLLSGALVSG----------PYALITTA 447

  Fly   459 ----------LMGLSNGIGTLAGII-----VPYALDGLIQA--NPTGCWTTVFTLA----ACVHL 502
                      |.|.|:.:.|:..||     |..||..|:..  :|:| |:.||.:.    ||..|
  Rat   448 VSADLGTHKSLKGNSHALSTVTAIIDGTGSVGAALGPLLAGLISPSG-WSNVFYMLMFADACALL 511

  Fly   503  502
              Rat   512  511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_001245848.1 MFS 98..512 CDD:119392 103/455 (23%)
MFS_1 101..475 CDD:284993 91/420 (22%)
Slc37a1NP_001011944.1 MFS_SLC37A1_2 21..520 CDD:340902 103/455 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342619
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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