DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGlut and Slc17a8

DIOPT Version :9

Sequence 1:NP_001245848.1 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_714947.1 Gene:Slc17a8 / 266767 RGDID:628870 Length:588 Species:Rattus norvegicus


Alignment Length:590 Identity:266/590 - (45%)
Similarity:356/590 - (60%) Gaps:64/590 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 FKEKATGVFGGLKPNME--KFEISQSYHGGHGG--YEEMEGGDREGRGPGGGHAYD-DDDDRPDS 66
            ||||.      |||..|  |..:..|.     |  ..:::|.:.|      |.|.: .::.||..
  Rat     9 FKEKI------LKPGKEGVKNAVGDSL-----GILQRKLDGTNEE------GDAIELSEEGRPVQ 56

  Fly    67 PASFEEIERPPLRKIDKYCKAECPCMPARYTIATMACVGFMIAFGMRCNMSAAKLKGEHNGTVFM 131
            .:.    .|.|:      |...|..:|.||.||.|:.:||.|:||:|||:..|.::..:|.||::
  Rat    57 TSR----ARAPV------CDCSCCGIPKRYIIAVMSGLGFCISFGIRCNLGVAIVEMVNNSTVYV 111

  Fly   132 -----------NWTVAVESHVDSSFFWGYLVTQIPGGFIASKFPANKIFGLSIVSSATLHLFVPF 185
                       ||.......:..||||||:|||||||||::||.||::||.:|..::||::|:|.
  Rat   112 DGKPEIQTAQFNWDPETVGLIHGSFFWGYIVTQIPGGFISNKFAANRVFGAAIFLTSTLNMFIPS 176

  Fly   186 AMTLMHGHVVICVRVLQGLFEGVTYPACHGIWRFWAPPMERSRLATLAFSGSYAGVVVGLPLSGL 250
            |..:.:| .|:|||:||||.||||||||||:|..||||:|||||||.:|.|||||.||.:||:|:
  Rat   177 AARVHYG-CVMCVRILQGLVEGVTYPACHGMWSKWAPPLERSRLATTSFCGSYAGAVVAMPLAGV 240

  Fly   251 LADAVGYQAPFYAYGVFGIIWYMFWIWLCFENPRKHPAISIPELKYIEKSLGESAHPTMPSLKTT 315
            |...:|:.:.||.||:|||||||||:...:|.|..||.||..|..|||.|:||.|:....|...|
  Rat   241 LVQYIGWASVFYIYGMFGIIWYMFWLLQAYECPAVHPTISNEERTYIETSIGEGANLASLSKFNT 305

  Fly   316 PWREMMRSMPVYAIIVANFCRSWNFYLLVLFQSSFLKHKFGFKVEEAGFVGSLPHLIMTTIVPFG 380
            |||....|:||||||||||||||.||||::.|.::.:..|||.:.:.|.:.::||::||.:||.|
  Rat   306 PWRRFFTSLPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFAISKVGLLSAVPHMVMTIVVPIG 370

  Fly   381 GMLADHLRKNGILSTTNVRKLFNCGGFGMEGLFFLFVAHSSTATGAMFALTCGVAFSGFAISGYN 445
            |.|||:||...||:||.|||:.||||||||....|.|..|.|...|:..|...|.||||||||:|
  Rat   371 GQLADYLRSRKILTTTAVRKIMNCGGFGMEATLLLVVGFSHTKGVAISFLVLAVGFSGFAISGFN 435

  Fly   446 VNHLDIAPRYASILMGLSNGIGTLAGIIVPYALDGLIQANPTGCWTTVFTLAACVHLVGCTFYGI 510
            ||||||||||||||||:|||:|||:|::.|..:..:.:......|..||.:||.||..|..|||:
  Rat   436 VNHLDIAPRYASILMGISNGVGTLSGMVCPLIVGAMTKHKTREEWQNVFLIAALVHYSGVIFYGV 500

  Fly   511 FASGELQPWAEPPAEEQKVWAPPPGAITNTDPSQAGMLG-DYMKETSFGAPEYTEQSQMQQSTAI 574
            |||||.|.||:|               .|....:.|::. |.:.|.:    |...::.:.....:
  Rat   501 FASGEKQDWADP---------------ENLSEEKCGIIDQDELAEET----ELNHEAFVSPRKKM 546

  Fly   575 SYGAT 579
            |||||
  Rat   547 SYGAT 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_001245848.1 MFS 98..512 CDD:119392 223/424 (53%)
MFS_1 101..475 CDD:284993 209/384 (54%)
Slc17a8NP_714947.1 MFS_SLC17A6_7_8_VGluT 79..502 CDD:340940 222/423 (52%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 539..588 5/13 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342513
Domainoid 1 1.000 440 1.000 Domainoid score I529
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 498 1.000 Inparanoid score I1323
OMA 1 1.010 - - QHG53923
OrthoDB 1 1.010 - - D144672at33208
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 1 1.000 - - otm46209
orthoMCL 1 0.900 - - OOG6_100421
Panther 1 1.100 - - O PTHR11662
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X201
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.910

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