DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGlut and SPOM_SPAC11D3.18C

DIOPT Version :10

Sequence 1:NP_608681.2 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_001342807.1 Gene:SPOM_SPAC11D3.18C / 2543005 PomBaseID:SPAC11D3.18C Length:498 Species:Schizosaccharomyces pombe


Alignment Length:512 Identity:113/512 - (22%)
Similarity:194/512 - (37%) Gaps:136/512 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 EIERPPLRKIDKYCKAECPCMPARYTIATMACVGF--MIAFGMRCNM---------SAAKLKGEH 125
            ::|:..|.|:|               :.....:||  ::||..|.|:         .|..|.||.
pombe    48 KVEKKLLLKMD---------------LVISPIIGFLYLMAFLDRSNIGNAAVAGMTEALSLYGER 97

  Fly   126 NGTVFMNWTVAVESHVDSSFFWGYLVTQIPGGFIASKFPANKIFG-LSIVSSATLHLFVPFAMTL 189
                 :|..|::       |:..|::.:.|...:..:..|:::.. :|...|.|: ||..| |:.
pombe    98 -----LNVAVSI-------FYVLYILVETPSVVLVKRIKASRMLAFISFAWSMTV-LFSGF-MSS 148

  Fly   190 MHGHVVICVRVLQGLFEGVTYPACH-GIWRFWAPPMERSRLATLAFSGSYAGVVVGLPLSGLLAD 253
            ..|  :|..|::.||.||..:||.: .:...:....:..||:.|..|...||.     ..||.|.
pombe   149 YGG--LIATRLILGLLEGCLFPALNLYLTTHYTRKEQCQRLSYLFASAGLAGA-----FGGLFAY 206

  Fly   254 AV---------GYQAPFYAYGVFGIIWYMFWIWLC-------FEN----PRKHPAISIPELKYIE 298
            |:         |:|   :.|.|.|::.:: .:.||       .||    .|:...::|     |.
pombe   207 ALEQVHAGNKEGWQ---WIYIVEGLVSFI-GVPLCLFALPDKMENAWFLTREEREVAI-----IR 262

  Fly   299 KSLGESAHPTMPSLKTTPWREMMRSM---PVYAIIVANFCRSWNFYLLVLFQ-SSFLKHKFGFKV 359
            :.:....|    ..:...|.|:.::.   .||....:.||..     :||:. ||||.    ..:
pombe   263 RDINARYH----GEQHFEWSEVRKAFKDPKVYVSATSQFCAD-----MVLYGFSSFLP----VII 314

  Fly   360 EEAGFVGSLPHLIMTTIVPFGGMLADHLRKNGILSTTNVRKLFNCGGFGMEGLFFLFVAHSSTAT 424
            :..|||| |....||..|...|::: .|....:...|.:|.::......:..:.::.:. :|.:.
pombe   315 KGLGFVG-LQTNYMTIPVYIAGVIS-FLFVAWLSDRTQLRAVYLISASTVVAVGYIIML-ASDSN 376

  Fly   425 GAMFALTCGVAFSGFAISGYNVNHL--DIAPRY-----ASILMGLSNGIGTLAGII-----VPYA 477
            .|.:..|..:|...:...|.|:..|  ::|..|     ..|...|:|..|.:||.|     .|..
pombe   377 AAKYTATYIIAIGCYIGPGLNLGWLNNNVAGHYKRATAIGIQQTLANSSGIVAGQIYRSKNAPKY 441

  Fly   478 LDGLIQANPTGCWTTVFTLAACVHLVGCTFYGIF--------------ASGELQPWA 520
            :.|           ..||| .||.:.|..:..:|              |.||..|.|
pombe   442 ILG-----------NAFTL-GCVIVGGLAYVVMFFSLRYVNKKRDERCARGEFDPSA 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_608681.2 MFS_SLC17A6_7_8_VGluT 99..512 CDD:340940 104/475 (22%)
SPOM_SPAC11D3.18CNP_001342807.1 MFS_FEN2_like 56..460 CDD:340885 105/476 (22%)

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