DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGlut and SPAC1039.04

DIOPT Version :9

Sequence 1:NP_001245848.1 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_594995.1 Gene:SPAC1039.04 / 2542960 PomBaseID:SPAC1039.04 Length:507 Species:Schizosaccharomyces pombe


Alignment Length:517 Identity:109/517 - (21%)
Similarity:162/517 - (31%) Gaps:186/517 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 RCNMSAAKLKG--EHNGTVFMNWTVAVESHVDSSFFWGYLVTQIPGGFIASKFPANKIFGLSIVS 175
            :.|:|.||..|  :..|.|...:.:.:     |.|:..:::...|..::..:|.|.:|....::|
pombe    76 KSNVSNAKTNGMDKDLGFVGDQYNIMI-----SIFYIPFVLCAFPFSYLYKRFGAARILPFFMLS 135

  Fly   176 SATLHLFVPFAMTLMHGHV-----VICVRVLQGLFEGVTYPACHGIWRFWAPPMERSRLA-TLAF 234
            ..        ||:|....|     ::.||...|:.|....|   |:..:......|:.|| .||.
pombe   136 FG--------AMSLCQAAVKNFGGMMAVRWFLGMAESAVLP---GVVYYLTTFYRRTELARRLAI 189

  Fly   235 SGSYAGVVVGLPLSGLLADAVGYQAPFYAYGVFGII------W-YMFWI-----WLC-------- 279
              .||...|.....|||           |||||.|.      | |:|.|     :||        
pombe   190 --FYAAANVSSAFGGLL-----------AYGVFHIKGGKLQGWQYLFLIEGGVTFLCAIVIFLVL 241

  Fly   280 ---------------------FENPRKHPAISIPELKYIEKSLGESAHPTMPSLKTTPW--REMM 321
                                 .||   ..:.:|.|....::||....||.     ...|  .||.
pombe   242 PVSVETANFLTDEEKTLAKMRIEN---DSSSAISEKLSFKQSLTVFKHPI-----AILWLLEEMA 298

  Fly   322 RSMPVYAIIVANFCRSWNFYLLVLFQSSFLKHKFGFKVEEAGFVGSLPHLIMTTIVPFGG----- 381
            ..:|:.:|         |.:|..:             |...|| .|:...:||......|     
pombe   299 LGVPLNSI---------NNWLPQI-------------VAAMGF-SSVNTNLMTVAPAISGAIWLL 340

  Fly   382 ---MLADHLRKNGI-----LSTTNVRKLFNCGGFGMEGLFFLFVAHSSTATGAMFALTCGVAFSG 438
               .::|.|:..||     :|||.:       ||.:.|...: :.|...:..|.|.:|.|.|.|.
pombe   341 VFAFISDFLKNRGIVLIAAISTTMI-------GFIVYGSIDI-MNHIGVSYFACFLMTAGAAASS 397

  Fly   439 FAISGY------------------------------NVNHLDIAPRYASILMGLSNGIGTL---- 469
            ...|.:                              |:.....||:|...| |::.|.|.|    
pombe   398 VLTSTWYNNNTPNESRRAVFTSVGVPLANVMGLVSANIFRPQDAPKYVPAL-GITAGFGGLGILL 461

  Fly   470 -AGIIVPYALDGLIQANPTGCWTTVFTLAACVHLVGCTFYGIFASGELQPWAEPPAEEQKVW 530
             |.|.|....|...:.|..|...|                  ||....:...|.||.....|
pombe   462 VASISVYMFFDNRRRDNAQGVKKT------------------FADVSTKDLGEGPANPNFRW 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_001245848.1 MFS 98..512 CDD:119392 103/497 (21%)
MFS_1 101..475 CDD:284993 98/460 (21%)
SPAC1039.04NP_594995.1 MFS 71..471 CDD:119392 99/463 (21%)
2A0114 71..463 CDD:273326 96/455 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 69 1.000 Domainoid score I2672
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 69 1.000 Inparanoid score I1933
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.050

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