DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGlut and SPCPB1C11.03

DIOPT Version :9

Sequence 1:NP_001245848.1 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_001342988.1 Gene:SPCPB1C11.03 / 2539453 PomBaseID:SPCPB1C11.03 Length:570 Species:Schizosaccharomyces pombe


Alignment Length:531 Identity:104/531 - (19%)
Similarity:184/531 - (34%) Gaps:179/531 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 GYEEMEGG------DREGRGPGGGHAYDDDDDRP-DSPASFEEIERPPLRKID-----------K 83
            |||..:|.      |.|.:    .:|.|....:| ||.....::|:...:||:           :
pombe    18 GYEIRQGSTDSSSLDLEKK----ENAVDTTIAKPFDSDEDIADVEKAGGKKINNSLIDETFAFMQ 78

  Fly    84 YCKAECPCMPARYT-------IATMACVGF--MIAFGMRCNMSAAKLKGEHNGTVFMNWTVAVES 139
            ..|...|..|.:.:       |..:..:||  |:.|..:..:|.:.:.|..:.   ::.|....:
pombe    79 DAKKLDPLTPKQESKLKWKLYIYLLLMLGFLDMMLFIGKATLSYSTILGLFDD---VHITSNQYN 140

  Fly   140 HVDSSFFWGYLVTQIPGGFIASKFPANKIFGLSIVSSATLHLFVPFAMTLMHGHVVICVRVLQGL 204
            ::::.|:.||:|.|.||.:|...||..|..|| :..|.::.:|:........|  :|.:|...|.
pombe   141 NLNTLFYVGYIVGQFPGHYIMQTFPLGKFVGL-VTFSWSVIVFLHCCAYNYGG--LIALRFFLGF 202

  Fly   205 FEGVTYPACHGIWRFWAPPMERSRLATLAFSGSYAGVVVGLPLSGLLADAVGYQAPFYAYGVFGI 269
            .|....||.......:....|::.|.               |:..:...:.|..|.|.|||    
pombe   203 TESCLLPAMEATMGMFFTHQEQAFLQ---------------PVFWISCLSCGIPAGFIAYG---- 248

  Fly   270 IWYMFWIWLCFENPRKHPAISIPELKYIEKSLGESAHPTMPSLKTTPWREMMRSMPVYAIIVANF 334
                                    |:::.||:             .||:       ::.||....
pombe   249 ------------------------LEFVTKSI-------------APWK-------LFMIITGGI 269

  Fly   335 CRSWNFYLLVLFQSS-------------------------------FLKHKFGFKVEEAGFVGSL 368
            ....:.:|...:..:                               |.||:|...:::       
pombe   270 TFFLSIFLFFYYPDNPSKARFLTDEEKLYTIDRVRKSTRGGIENKIFKKHQFIEALKD------- 327

  Fly   369 PHLIMTTIVPFGGMLADHL--RKNGILSTTNVRKL-FNCGGFGMEG---------LFFLFVAHSS 421
            |...:.|...|..||:::|  ::|.|.::.||..| ....|..:.|         .|.:::..:.
pombe   328 PITWLFTFAAFTLMLSNNLAYQQNLIFTSLNVSDLNSTLVGVALAGYNTVSAIIATFAMYLIPNQ 392

  Fly   422 TATGAMF----ALTCGVAFSGFAISGYNVNHLDIAPRYASILMGLSNGIGTLAGIIVPYALD-GL 481
            :|..|||    ::|.|:||                     :.:..||.||.||.:|:  |.| |:
pombe   393 SAYHAMFWMLPSITGGIAF---------------------VALPWSNRIGELATMII--ASDFGI 434

  Fly   482 IQANPTGCWTT 492
            ......| |||
pombe   435 TYIIALG-WTT 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_001245848.1 MFS 98..512 CDD:119392 87/445 (20%)
MFS_1 101..475 CDD:284993 79/422 (19%)
SPCPB1C11.03NP_001342988.1 UhpC 102..494 CDD:332119 86/443 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 69 1.000 Domainoid score I2672
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 69 1.000 Inparanoid score I1933
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.050

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