DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGlut and SPCC417.10

DIOPT Version :9

Sequence 1:NP_001245848.1 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_588287.1 Gene:SPCC417.10 / 2539419 PomBaseID:SPCC417.10 Length:508 Species:Schizosaccharomyces pombe


Alignment Length:523 Identity:113/523 - (21%)
Similarity:200/523 - (38%) Gaps:132/523 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 EMEGGDREGRGPGG--GHAYDDDDDRPDSPASFEEIERPPLRKIDKYCKAECPCMPARYTIATMA 102
            :::.||...:|...  .:|.|.|.|..|     .|.||..:||||        |     ||..:.
pombe    23 DVDVGDLSPKGVDAAFNYALDVDYDEID-----PETERRLVRKID--------C-----TIFPVM 69

  Fly   103 CVGFMIAFGMRCNMSAAKLKG-----EHNGTVFMNWTVAVESHVDSSFFWGYLVTQIPGGFIASK 162
            |:.:.|.|..:.:.|.|.:.|     :..|.:: :|:       .::|:.||||.:.|...:..:
pombe    70 CLVYCIQFLDKTSNSYAVIMGLKEDLKMEGQMY-SWS-------GTAFYLGYLVFEFPASLLLQR 126

  Fly   163 FPANKIFGLSIVSSATLHLFVPFAMTLMHGHV-VICVRVLQGLFEGVTYPACHGIWRFWAPPMER 226
            ||.:|...:.:|....|     ..||.:..:. .|.:|||.|:.|....|....:...|....|:
pombe   127 FPLSKTLCVFLVIWGFL-----LCMTSVANYPGFIALRVLLGMMESAASPGFILLTAQWYKRSEQ 186

  Fly   227 SRLAT---LAFSGSYAGVVVG------------LPLSG--LLADAVGYQAPFYAYGVFGII-WYM 273
             :|.|   :||:|  .|.::|            ||:.|  |:....|..|.|..:.:..:: ...
pombe   187 -QLRTSVWVAFNG--LGQILGSCMAYGLAKRTSLPMRGWKLIFIICGVLAIFLGFVILAVVPDNP 248

  Fly   274 FWIWLCFENPRKHPAISIPELKYIEKSLGESAHPTMPSLKTTPWREMMRSMPVYAIIVANFCRSW 338
            |..|...|..||   :.:..|:..::.:|.:      ..|...::|.|..:..:.:.|::...:.
pombe   249 FKAWFLTEEDRK---LVVKRLRANKQGVGNN------HFKLYQFKETMLDIRTWIMFVSSVLLNI 304

  Fly   339 NFYLLVLFQSSFLKHKFGFKVEEAGFVGSLPHLIMTTIVPFGGMLAD-----HLRKNGILS--TT 396
            ....:..|.|..:|...|:...:...:| ||    .....|||::|.     .:.|..:|:  ||
pombe   305 PNGGIGTFSSLLIKGTMGYDTLQTLLMG-LP----AGACEFGGLIAFGFLSLFIHKRMVLATITT 364

  Fly   397 NVRKLFNC------------GGFGM-----EGLFFLFVAHSSTATGAMFALTCGVAFSGFAISGY 444
            .:..:.:|            .|:.:     ..:..:|...||.|:|....:|.||.:    :.||
pombe   365 CIALIGSCLLSFAGPPRAQLAGYYLLMVSPGAMIVMFAIISSNASGYTKKVTVGVIY----LIGY 425

  Fly   445 NVNHL---------DIAPRYASILMGLSNGIGTLAGIIVPY-----------------ALDGLIQ 483
            .|.:|         | ||.|   :...:..:|..|..:|.:                 |.:|.|:
pombe   426 CVGNLIGPQTFKAAD-APEY---MPAKNTMVGCYAATLVTFPALYYVNWRENKRRDQLAAEGKIE 486

  Fly   484 ANP 486
            ..|
pombe   487 HRP 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_001245848.1 MFS 98..512 CDD:119392 96/463 (21%)
MFS_1 101..475 CDD:284993 90/430 (21%)
SPCC417.10NP_588287.1 MFS 66..436 CDD:119392 84/403 (21%)
2A0114 71..468 CDD:273326 90/434 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 69 1.000 Domainoid score I2672
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 69 1.000 Inparanoid score I1933
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.050

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