DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment VGlut and Slc37a1

DIOPT Version :9

Sequence 1:NP_001245848.1 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_001229356.1 Gene:Slc37a1 / 224674 MGIID:2446181 Length:531 Species:Mus musculus


Alignment Length:453 Identity:100/453 - (22%)
Similarity:160/453 - (35%) Gaps:140/453 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 VDSSFFWGYLVTQIPGGFIASKFPAN--KIFGLSIVSSATLHLFVPFAMTLMH--GHVVICVRVL 201
            :|.:|...|.:.....|.|..:.|..  ..||: :.|.|...||.......:|  |..|: .:::
Mouse   102 LDYAFLCAYAIGMYLSGIIGERLPIRYYLTFGM-LASGAFTALFGLGYFYNIHSLGFYVV-TQII 164

  Fly   202 QGLFEGVTYPACHGIWRFWAPPMERSRLATLAFSGSYAGVVVGLPLSGLLAD---AVGYQAPFYA 263
            .||.:...:|:.......|.....|..:..:..|.:..|.::|..::|....   .:.:..|...
Mouse   165 NGLVQTTGWPSVVTCLSNWFGKGRRGLIMGIWNSHTSVGNILGSLIAGYWVSTCWGLSFIVPGAI 229

  Fly   264 YGVFGIIWYMFWIWLCFENPR---------KHPAIS----------------------IPELKYI 297
            ....||:.::|.|    |:|:         .||..|                      .|||:.:
Mouse   230 VAAMGIVCFLFLI----EHPKDVKCSSTLPTHPRASENGINRFRLQKQTTYSEKNGPLDPELQCL 290

  Fly   298 EKSLGES-AHPT----MPSLKTTPWREMMRSMPVYAIIVANFCRSWNFYLLVLFQSSFLKHKFGF 357
            ..|.|:: .||:    :|:...........::.:..:|        .|.|.:||.          
Mouse   291 LLSDGKNPLHPSHIVVLPADGNMAAISFTGALRIPGVI--------EFSLCLLFA---------- 337

  Fly   358 KVEEAGFVGSLPHLIMTTIVPFGGMLADHL--RKNGILSTTNVRKLFNCGG-FG----------M 409
            |:....|:..|| |.:|::        |||  :|.|.|||     ||:.|| ||          :
Mouse   338 KLVSYTFLFWLP-LYITSV--------DHLDAKKAGELST-----LFDVGGIFGGILAGVISDRL 388

  Fly   410 E------GLFFLFVA-----HSSTATGAMFALTCGVAFSGFAISGYNVNHLDIAPRYASI----- 458
            |      ||..|..|     .||.:...:.|....:..||..:||          .||.|     
Mouse   389 EKRASTCGLMLLLAAPTLYVFSSVSRMGLEATIAMLLLSGALVSG----------PYALITTAVS 443

  Fly   459 --------LMGLSNGIGTLAGII-----VPYALDGLIQA--NPTGCWTTVFTLA----ACVHL 502
                    |.|.|:.:.|:..||     |..||..|:..  :|:| |:.||.:.    ||..|
Mouse   444 ADLGTHKSLKGNSHALSTVTAIIDGTGSVGAALGPLLAGLISPSG-WSNVFYMLMFADACALL 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_001245848.1 MFS 98..512 CDD:119392 100/453 (22%)
MFS_1 101..475 CDD:284993 88/418 (21%)
Slc37a1NP_001229356.1 MFS_SLC37A1_2 21..514 CDD:340902 100/453 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 53..72
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838812
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.