DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGlut and Slc17a8

DIOPT Version :9

Sequence 1:NP_001245848.1 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_892004.1 Gene:Slc17a8 / 216227 MGIID:3039629 Length:601 Species:Mus musculus


Alignment Length:612 Identity:267/612 - (43%)
Similarity:349/612 - (57%) Gaps:85/612 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KGLTAFKEKATGVFGGLKPNME--------KFEISQSYHGGHGGYEEMEGGDREGRGPGGGHAYD 58
            |....||||.      |||..|        ...|.|....|....|:....:.|||         
Mouse     4 KAFDTFKEKI------LKPGKEGVKNAVGDSLGILQRKIDGTNEEEDAIELNEEGR--------- 53

  Fly    59 DDDDRPDSPASFEEIERP---------PLRKIDKYCKAECPCMPARYTIATMACVGFMIAFGMRC 114
                    |.......||         |.|.|   |...|..:|.||.||.|:.:||.|:||:||
Mouse    54 --------PVQTSRAHRPVCDCSCCGIPKRYI---CDCSCCGIPKRYIIAVMSGLGFCISFGIRC 107

  Fly   115 NMSAAKLKGEHNGTVFM-----------NWTVAVESHVDSSFFWGYLVTQIPGGFIASKFPANKI 168
            |:..|.::..:|.||::           ||.......:..||||||:|||||||||::||.|:::
Mouse   108 NLGVAIVEMVNNSTVYVDGKPEIQTAQFNWDPETVGLIHGSFFWGYIVTQIPGGFISNKFAASRV 172

  Fly   169 FGLSIVSSATLHLFVPFAMTLMHGHVVICVRVLQGLFEGVTYPACHGIWRFWAPPMERSRLATLA 233
            ||.:|..::||::|:|.|..:.:| .|:.||:||||.||||||||||:|..||||:|||||||.:
Mouse   173 FGAAIFLTSTLNMFIPSAARVHYG-CVMGVRILQGLVEGVTYPACHGMWSKWAPPLERSRLATTS 236

  Fly   234 FSGSYAGVVVGLPLSGLLADAVGYQAPFYAYGVFGIIWYMFWIWLCFENPRKHPAISIPELKYIE 298
            |.|||||.||.:||:|:|...:|:.:.||.||:|||||||||:...:|.|..||.||..|..|||
Mouse   237 FCGSYAGAVVAMPLAGVLVQYIGWASVFYIYGMFGIIWYMFWLLQAYECPAAHPTISNAERTYIE 301

  Fly   299 KSLGESAHPTMPSLKTTPWREMMRSMPVYAIIVANFCRSWNFYLLVLFQSSFLKHKFGFKVEEAG 363
            .|:||.|:....|...||||....|:||||||||||||||.||||::.|.::.:..|||.:.:.|
Mouse   302 TSIGEGANLASLSKFNTPWRRFFTSLPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFAISKVG 366

  Fly   364 FVGSLPHLIMTTIVPFGGMLADHLRKNGILSTTNVRKLFNCGGFGMEGLFFLFVAHSSTATGAMF 428
            .:.::||::||.:||.||.|||:||...||:||.|||:.||||||||....|.|..|.|...|:.
Mouse   367 LLSAVPHMVMTIVVPIGGQLADYLRSRKILTTTAVRKIMNCGGFGMEATLLLVVGFSHTKGVAIS 431

  Fly   429 ALTCGVAFSGFAISGYNVNHLDIAPRYASILMGLSNGIGTLAGIIVPYALDGLIQANPTGCWTTV 493
            .|...|.||||||||:|||||||||||||||||:|||:|||:|::.|..:..:.:......|..|
Mouse   432 FLVLAVGFSGFAISGFNVNHLDIAPRYASILMGISNGVGTLSGMVCPLIVGAMTKHKTREEWQNV 496

  Fly   494 FTLAACVHLVGCTFYGIFASGELQPWAEPPAEEQKVWAPPPGAITNTDPSQAGMLGDYMKETSFG 558
            |.:||.||..|..|||:|||||.|.||:|               .|....:.|::..        
Mouse   497 FLIAALVHYSGVIFYGVFASGEKQDWADP---------------ENLSEDKCGIIDQ-------- 538

  Fly   559 APEYTEQSQMQQSTAI------SYGAT 579
             .|..|::::...|.:      |||||
Mouse   539 -DELAEETELNHETFVSPRKKMSYGAT 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_001245848.1 MFS 98..512 CDD:119392 221/424 (52%)
MFS_1 101..475 CDD:284993 207/384 (54%)
Slc17a8NP_892004.1 2A0114euk 88..526 CDD:129972 232/453 (51%)
MFS 93..515 CDD:119392 219/422 (52%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 576..601
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 440 1.000 Domainoid score I548
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 498 1.000 Inparanoid score I1363
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53923
OrthoDB 1 1.010 - - D144672at33208
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 1 1.000 - - otm44115
orthoMCL 1 0.900 - - OOG6_100421
Panther 1 1.100 - - O PTHR11662
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1866
SonicParanoid 1 1.000 - - X201
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.010

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