DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment VGlut and Slc17a1

DIOPT Version :9

Sequence 1:NP_001245848.1 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:XP_006516679.1 Gene:Slc17a1 / 20504 MGIID:103209 Length:498 Species:Mus musculus


Alignment Length:487 Identity:151/487 - (31%)
Similarity:238/487 - (48%) Gaps:41/487 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 DDDRPDSPASFEEIERPPL-RKIDKYCKAECPCMPARY---------TIATMA---CVGF-MIAF 110
            |.|:........::|...| :|:..:|.       .||         .||.||   |:.. |:| 
Mouse    21 DGDQAQQQEDKSQMENQCLPKKVPGFCS-------FRYGLAILLHFCNIAIMAQRVCLNLTMVA- 77

  Fly   111 GMRCNMSAAKLKGEHNGTVFMN-------WTVAVESHVDSSFFWGYLVTQIPGGFIASKFPANKI 168
             |..|..:..|..|....:..|       |:..::..:.||.|:|.:|.|.|.|:::..:|..:|
Mouse    78 -MVNNTGSPHLSNESVVEMLDNVKNPVYSWSPDIQGLILSSVFFGMVVVQAPVGYLSGIYPMKRI 141

  Fly   169 FGLSIVSSATLHLFVPFAMTLMHGHVVICVRVLQGLFEGVTYPACHGIWRFWAPPMERSRLATLA 233
            .|.|:..|:.:.|.:|.|..:....|::| |||||:.:|......|.||..||||:||.||.::.
Mouse   142 IGSSLFLSSLMSLLLPPAAQVGAALVIVC-RVLQGIAQGTVSTGQHEIWVKWAPPLERGRLTSMT 205

  Fly   234 FSGSYAGVVVGLPLSGLLADAVGYQAPFYAYGVFGIIWYMFWIWLCFENPRKHPAISIPELKYIE 298
            .||...|..:.|.:||.:.|.:|:...||.:|:.|.:..:.|.:|.|::|:.||.:|..|..||.
Mouse   206 LSGFVMGPFIVLLVSGFICDLLGWPMVFYIFGIVGCVLSLSWFFLFFDDPKDHPYMSSSEKDYII 270

  Fly   299 KSLGESAHPTMPSLKTTPWREMMRSMPVYAIIVANFCRSWNFYLLVLFQSSFLKHKFGFKVEEAG 363
            .||.:.|.....||   |.:.|::|:|::|||:.:|...|:..|||.:..:|:.......|.|.|
Mouse   271 SSLMQQASSGRQSL---PIKAMLKSLPLWAIILNSFAFIWSNSLLVTYTPTFISTVLHVNVRENG 332

  Fly   364 FVGSLPHLIMTTIVPFGGMLADHLRKNGILSTTNVRKLFNCGGFGMEGLF---FLFVAHSSTATG 425
            .:.|||:|:........|.::|......|.|...|||||...|.....:|   .|:::::..:| 
Mouse   333 LLSSLPYLLAYICGILAGQMSDFFLTRKIFSIVTVRKLFTTLGSFCPVIFIMCLLYLSYNFYST- 396

  Fly   426 AMFALTCGVAFSGFAISGYNVNHLDIAPRYASILMGLSNGIGTLAGIIVPYALDGLI-QANPTGC 489
             :..||...:...|:..|..:|.|||||||...|..::..||...|:| ...|.||| ..:|...
Mouse   397 -VIFLTLANSTLSFSYCGQLINALDIAPRYYGFLKAVTALIGMFGGLI-SSTLAGLILNQDPEYA 459

  Fly   490 WTTVFTLAACVHLVGCTFYGIFASGELQPWAE 521
            |..:|.|.|.:::....||.:||.||:|.||:
Mouse   460 WHKIFFLMAGINVTCLVFYFLFAKGEIQDWAK 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_001245848.1 MFS 98..512 CDD:119392 136/428 (32%)
MFS_1 101..475 CDD:284993 123/387 (32%)
Slc17a1XP_006516679.1 2A0114euk 34..497 CDD:129972 149/474 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838804
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.840

Return to query results.
Submit another query.