DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGlut and W04C9.6

DIOPT Version :9

Sequence 1:NP_001245848.1 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_490737.2 Gene:W04C9.6 / 189185 WormBaseID:WBGene00021028 Length:459 Species:Caenorhabditis elegans


Alignment Length:461 Identity:100/461 - (21%)
Similarity:197/461 - (42%) Gaps:44/461 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 MPARYTIATMA--CVGFMIAFGMRCNMSAAKLKGEHN-GTVFMNWTVAVESHVDSSFFWGYLVTQ 153
            :|.|:.|...|  |:..:::.....|.:...::.::: .|..:|:|.:..:.:.|....|.|...
 Worm     6 VPVRFLILICATLCLTSILSNMNTYNFTKICMQDDNSTSTSKVNYTKSESNFLQSCVAIGSLAAS 70

  Fly   154 IPGGFIASKFPANKIFGLSIVSSATLHLFVPFAMTLMHGHVVICVRVLQGLFEGVTYPACHGIWR 218
            ||........|...:|.::.:.|......:|.|.|:.:|..| ..|:.||:....|:|....|..
 Worm    71 IPFSISFQHLPHKPVFIVAGIISGVSTALIPLASTIGYGWFV-AARICQGMAFSATFPLAGSITA 134

  Fly   219 FWAPPMERSRLATLAFSGSYAGVVVG---------LPLSG-LLADAVGYQAPFYAY-GVFGIIWY 272
            .||.|.|.         |.:.|::.|         :|:|| |.:.:.|:.:.:|.: ||..:.:.
 Worm   135 NWATPYEH---------GVFIGLLTGNTQLSNIFTMPVSGWLCSSSGGWTSVYYVHAGVSLVTFS 190

  Fly   273 MFWIWL-CFENPRKHPAISIPELKYIE--KSLGESAHPTMPSLKTTPWREMMRSMPVYAIIVANF 334
            :|:::. |  :|.:|..:...||:.|.  ||..:.:.|     |..|:|.::.|:.::|..:|:|
 Worm   191 LFFLFFKC--SPSEHSWVGEKELERIREGKSGKKVSRP-----KNLPFRHILTSLSLWACWIASF 248

  Fly   335 CRSWNFYLLVLFQSSFLKHKFGFKVEEAGFVGSLPHLIMTTIVPFGGMLADHLRKNGILSTTNVR 399
            .......|:..|...::|:...:.|..:||:.:||.:.........|:::|:::   .:|.|...
 Worm   249 GDLITVQLVSQFNPQYMKNYLNYDVLSSGFLAALPIIFQFFTKLSSGIISDYIK---FISETLKT 310

  Fly   400 KLFNCGGFGMEGLFFLFVAH--SSTATGAMFALTCGVAFSGFAISGYNVNHLDIAPRYASILMGL 462
            |:||.....:..:||:.:|.  ......|:..:.|..:..|...:|:|......:.:||...|..
 Worm   311 KIFNTIALAVAAVFFIVLAFIPQEKHLLAIIIMICAESVMGCNTAGFNKCATLHSQQYAYFAMQQ 375

  Fly   463 SNGIGTLAGIIVPYALDGLIQANPTGCWTTVFTLAACVHLVGCTFYGIFASGELQPWA-----EP 522
            ...|......|.|:.::.::..:....|...|...|.:.|...|.:.:||......|.     :.
 Worm   376 IMNIWACTIFIEPFFVNMIVTDDTFTDWRNCFLAHAGLLLFVNTIFCLFADASPAKWTRLQDDDV 440

  Fly   523 PAEEQK 528
            ..||:|
 Worm   441 AIEEEK 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_001245848.1 MFS 98..512 CDD:119392 92/432 (21%)
MFS_1 101..475 CDD:284993 85/392 (22%)
W04C9.6NP_490737.2 2A0114euk 14..432 CDD:129972 93/437 (21%)
MFS 49..424 CDD:119392 87/394 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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