DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGlut and T28H11.8

DIOPT Version :9

Sequence 1:NP_001245848.1 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_500705.2 Gene:T28H11.8 / 189063 WormBaseID:WBGene00020906 Length:465 Species:Caenorhabditis elegans


Alignment Length:428 Identity:89/428 - (20%)
Similarity:167/428 - (39%) Gaps:71/428 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 FFWGYLVTQIPGGFIASKFPANKIFGLSIVSSATLHLFVPFAMTLMHGHVVICVRVLQGLFEGVT 209
            :|.|:|.|::            .||...|:|:.:..|: |...:|.....::| |...|..:...
 Worm    78 YFVGFLSTRV------------LIFTYGIMSALSSILY-PLFDSLGFWPALVC-RFFAGFAQASQ 128

  Fly   210 YPACHGIWRFWAPPMERSRLATLAFSGSYAGVVVGLPLSGLLADA--VGYQAPFYAYGVFGIIWY 272
            ....:.:...|.|..|.|...::..:.|..|.:..:.|.|.:..:  .|::|.:|..||...|..
 Worm   129 LHFTNDLVLRWTPESEASFFFSIMLATSQFGPLFTMILGGEMCSSSFFGWEATYYILGVGTFISS 193

  Fly   273 MFWIWLCFENPRKHPAISIPELKYIEKSLGESAHPTMPSLKTTPWREMMRSMPVYAIIVANFCRS 337
            ..:.:...:|..|:..:...|.|||.    ...|.|....| .|::.:::...:: |.:..|.  
 Worm   194 TAFAYYYSDNVEKNCNLEESEKKYIL----AGKHSTKEKEK-VPYKALLKDSTIW-ISLLMFT-- 250

  Fly   338 WNFYL-LVLFQS---SFLKHKFGFKVEEAGFVGSLPHLIMTTIVPFGGMLADHLRKNGILSTTNV 398
             .:|| ::::|.   :|:|....|.:.|.|:..::|.||...|....|.|.|            |
 Worm   251 -GYYLAMIVYQQYSPTFIKQVLHFTIRETGYFSAIPQLIAIFIKIGCGRLLD------------V 302

  Fly   399 RKLFNCGG--------FGMEGL--FFLFVAHSSTATG----AMFALTCGVAFSG--FAISGYNVN 447
            :  |.||.        ..:|.:  |.||:      ||    .:::|...:.|:.  |.:......
 Worm   303 K--FGCGPKLTLVVPLLILESMSAFSLFL------TGFLDDRVWSLIFMMIFASLHFFVPVICSR 359

  Fly   448 HLDI-APRYASILMGLSNGIGTLAGIIVPYALDGLIQANPTGCWTTVFTLAACVHLVGCTFYGIF 511
            .:.| |.:::...:.|:..|..:|.|::|..:...:..|....|:.||.......::....|.:|
 Worm   360 TIQIRAGQHSHFALNLNMVIAGIAQILIPLGVQAAVPENTRSQWSFVFYFLVITVVITSILYTLF 424

  Fly   512 ASGELQPWA-EPPAEEQKVW----APPPGAITNTDPSQ 544
            :......|. :..|.|..::    ..||..||...|.:
 Worm   425 SRATPAEWTMKKRASEYTIYRLSDISPPEPITIPMPRE 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_001245848.1 MFS 98..512 CDD:119392 80/389 (21%)
MFS_1 101..475 CDD:284993 74/352 (21%)
T28H11.8NP_500705.2 2A0114euk 1..437 CDD:129972 82/401 (20%)
MFS 51..424 CDD:119392 80/388 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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