DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGlut and F59A1.13

DIOPT Version :9

Sequence 1:NP_001245848.1 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_507475.2 Gene:F59A1.13 / 186565 WormBaseID:WBGene00010299 Length:494 Species:Caenorhabditis elegans


Alignment Length:509 Identity:115/509 - (22%)
Similarity:200/509 - (39%) Gaps:102/509 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 SPASFEEIE------RPPLRKIDK---------YCKA---ECPCMPARYTIA---TMACVGFMIA 109
            |..|.:|.|      ..|.||:.|         |...   .|..:....::|   |:.|:..::.
 Worm    27 SQESLKEFEFSRQNFGGPKRKVSKNVLGHRTRWYIMVVLLSCLTLNQMNSVAYSFTVICMDDLVE 91

  Fly   110 FGMRCNMSAAKLKGEHNGTVFMNWTVAVESHVDSSFFW-----GYLVTQIPGGFIASKFPANKIF 169
                 ...|..|.|.|       |   :||..:.|..:     |.::..:|...:........:.
 Worm    92 -----EHHARNLTGHH-------W---MESSTEKSLIFSATAIGAVMGLVPSVPLIDSLGIRGVL 141

  Fly   170 GLSIVSSATLHLFVPFAMTLMHGHVVICVRVLQGLFEGVTYPACHGIWRFWAPPMERSRLATLAF 234
            .:|...||...||.||::......|:.| ||||||...|.......|...|||..|......:..
 Worm   142 SISGAFSALGTLFFPFSVDSNIYAVIFC-RVLQGLGVSVIMTVVGVIPGTWAPTSETGTFMAILS 205

  Fly   235 SGSYAGVVVGLPLSGLLADA-VGYQAPFYAYG----VFGIIWYMFWIWLCFENPRKHPAISIPEL 294
            ......:::.:|:||.|.:: .|:::.:|.:|    :|..|:|:|:.    ::||.|..:|..||
 Worm   206 CVFQLSMIICMPVSGFLCESRFGWRSIYYIFGGSTIIFYAIFYIFYT----DSPRFHRNVSEKEL 266

  Fly   295 KYIEKSLGESAHPTMPSLKTTPWREMMRSMPVYAII---------VANFCRSWNFYLLVLFQSSF 350
            |.||....|.               :...:|.:||.         ::.|..::.|.:|.|:..::
 Worm   267 KKIEDGKMEI---------------VKEGVPYWAICTDGTVLVGWLSVFGGNFGFTILTLYGPTY 316

  Fly   351 LKHKFGFKVEEAGFVGSLPHLIMTTIVPF-GGMLADHLRKNGILSTTNVRKLFNCGGFGMEG--- 411
            ||....|.|::.||..:|| .|::.:..| .|.::|.:.    ..|..:|  |:......:|   
 Worm   317 LKDVLNFDVKKTGFATALP-FILSALSKFAAGRISDRMD----FLTEKMR--FSVCTIVSQGSVV 374

  Fly   412 LFFLFVAHSSTATGAMFALTCGVAFSGFAISGYNVNHLDIAPR----YASILMGL---SNGIGT- 468
            :..|.:|.:.....|.||.|..:..||.:|.| |:..:.:..|    :|..:..|   :|..|. 
 Worm   375 IGLLLMAMTENWRIAQFAYTFAITASGLSIVG-NIKCIQLRCRQHTHFALTVSSLGIYANYFGAP 438

  Fly   469 -LAGIIVPYALDGLIQANPTGCWTTVFTLAACVHLVGCTFYGIFASGELQPWAE 521
             :.||:...|      .|....|:.:|.:.|.|.::....:....|.|..|:.:
 Worm   439 IVVGILTSAA------GNTAENWSHLFIIVAVVTVITNAPFPFLTSDEPGPYVK 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_001245848.1 MFS 98..512 CDD:119392 102/448 (23%)
MFS_1 101..475 CDD:284993 94/405 (23%)
F59A1.13NP_507475.2 MFS 106..473 CDD:391944 93/400 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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