DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGlut and slc-17.5

DIOPT Version :9

Sequence 1:NP_001245848.1 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_505139.1 Gene:slc-17.5 / 184790 WormBaseID:WBGene00017681 Length:530 Species:Caenorhabditis elegans


Alignment Length:416 Identity:102/416 - (24%)
Similarity:180/416 - (43%) Gaps:15/416 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 GMRCNMSAAKLKGEHNGTVFMNWTVAVESHVDSSFFWGYLVTQIPGGFIASKFPANKIFGLSIVS 175
            |..|.....|:..::.||..  |:|:.:.::.|:.|.|..:...|.|.:..:|.|..|..::|:.
 Worm    97 GESCTKLEGKVIKDYGGTFI--WSVSWQGYIVSAAFLGGFIFSYPAGVLVDRFSARHILSVAILM 159

  Fly   176 SATLHLFVPFAMTLMHGHVVICVRVLQGLFEGVTYPACHGIWRFWAPPMERSRLATLAFSGS-YA 239
            .....|.:|.....:........|.:.|:.|.:..|:.:.:...|.|..|:|..|::..:|: .:
 Worm   160 LTIASLLMPVLSIYIGEKGAFAGRFVMGISETMLIPSINSMVTKWIPINEKSLAASVFTAGNQLS 224

  Fly   240 GVVVGLPLSGLLADAVGYQAPFYAYGVFGIIWYMFWIWLCFENPRKHPAISIPELKYIEKSLGES 304
            |:...:.::.|.|.:.|:.:.||:..:|||.|.:.|......:|.....|...||.|    |..:
 Worm   225 GMFGNILVAELCASSFGWSSIFYSASLFGISWLVLWHLTVRNSPHNTRWIHKRELDY----LANN 285

  Fly   305 AHPTMPS--LKTTPWREMMRSMPVYAIIVANFCRSWNFYLLVLFQSSFLKHKFGFKVEEAGFVGS 367
            ..|..||  :|.||||:|:.|...::::..:...:....|:.::...:.|......|:..||..:
 Worm   286 IPPKHPSSVVKKTPWRDMLTSKVFWSLMFNSVMGNMMIALIFVYIPVYFKDVLMLDVQSNGFYSA 350

  Fly   368 LPHLIMTTIVPFGGMLADHLRKNGILSTTNVRKLFNCGGFGMEGL----FFLFVAHSSTATGAMF 428
            :||:.........|.|.|.:|...|||.:...||....  .|.|:    |||...:.:|...|:.
 Worm   351 IPHISNLIAKLIWGYLMDKMRHKKILSPSATVKLSQFA--SMMGISVSCFFLRYMNCATPFYALV 413

  Fly   429 ALTCGVAFSGFAISGYNVNHLDIAPRYASILMGLSNGIGTLAGIIVPYALDGLIQANPTGCWTTV 493
            .|:...||.|.:|||:..:.|.|||.:...|..|:..||.:..:..|..:...........|..|
 Worm   414 LLSSVSAFFGLSISGFYTSLLSIAPSHIGTLTSLATVIGFVGRMFTPLMISYYKTVGTAEEWGHV 478

  Fly   494 FTLAACVHLVGCTFYGIFASGELQPW 519
            ..:.......|...:.:|.||::|.|
 Worm   479 LLIYVFASATGGIIFLLFGSGDVQNW 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_001245848.1 MFS 98..512 CDD:119392 97/407 (24%)
MFS_1 101..475 CDD:284993 93/370 (25%)
slc-17.5NP_505139.1 MFS 108..497 CDD:391944 94/396 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D497052at2759
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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