DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGlut and F10C2.7

DIOPT Version :9

Sequence 1:NP_001245848.1 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_506020.2 Gene:F10C2.7 / 184290 WormBaseID:WBGene00008647 Length:458 Species:Caenorhabditis elegans


Alignment Length:432 Identity:88/432 - (20%)
Similarity:166/432 - (38%) Gaps:63/432 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 RYTIA--TMACVGFMIAFGMRCNMSAAKLKGE-------HNGTVFMNWTVAVESHVDSSFFWGYL 150
            ||.:.  .:||:..:::..:..|.:...:|.:       .|||::..:..:|..  .|:..|...
 Worm     9 RYIVVFLGLACLTSILSNYIIINFTFICMKDDPTGIETTENGTIYNRYDYSVAE--KSAIVWAVA 71

  Fly   151 VTQI----PGGFIASKFPANKIFGLSIVSSATLHLFVPFAMTLMHGHVVICVRVLQGLFEGVTYP 211
            :..|    |..:...:|.|...|.::.:.||...:..|:...|...: ::.:|..|||.....:.
 Worm    72 IGTILGTGPINYSYVRFGARIPFFIAGIVSAFATVLTPYGAYLGLPY-LLALRFAQGLAYSADFA 135

  Fly   212 ACHGIWRFWAPPMERSRLATLAFSGSYAGVVVGLPLSG-LLADAVGYQAPFYAYGVFGIIWYMFW 275
            |...:...|||..:.....::..|.|.|..|:....|| |...:.|:|:.||.:...|.|.:..|
 Worm   136 AIGIVCVRWAPLAQTGLFISILTSFSPAATVMTNAASGWLCKSSYGWQSAFYVHAAAGFIIFAAW 200

  Fly   276 IWLCFENPRKHPAISIPELKYIEKSLGESAHPTMPSLKTTPWREMMRSMPVYAIIVANFCRSWNF 340
            ::...::|:.:..:|..||..|:|. ...||....|.  .|:.|:.::..:..:.:.:|......
 Worm   201 LYFYNDDPQLNQKVSAKELTTIQKD-KTKAHIERDSF--VPYWEICKNRVILTVWINSFFEMTTL 262

  Fly   341 YLLVLFQSSFLKHKFGFKVEEAGFVGSLPHLIMTTIVPFGGMLADHLRKNGILSTTNVRKLFNCG 405
            .||:.:...:.:....|.|.|.|.:.||..:.........|.|:|    ...||.......||..
 Worm   263 ILLLTYSPIYFRKVLDFSVVETGMLISLSAVAHMPAKLLSGWLSD----RQFLSERVRMWFFNTS 323

  Fly   406 GFGMEGLFFLFVAHSSTA----TGAMFAL-------TCGVAFSGFAISGYNVNHLDIAPRYASIL 459
            ..|:.|...:.:|:...:    :..||::       .||    ||...|...:.     :||..:
 Worm   324 SVGLAGFMCVSLAYIPVSWKYTSVIMFSIVYTLMGTNCG----GFYKCGTFASR-----QYAHFV 379

  Fly   460 MGLSNGIGTLAGIIVP-------------------YALDGLI 482
            :.:...:..:|....|                   |.|:||:
 Worm   380 LAMIQFMKCIALFAAPATVAIFVSDESSHTQWGHVYILNGLL 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_001245848.1 MFS 98..512 CDD:119392 86/429 (20%)
MFS_1 101..475 CDD:284993 81/396 (20%)
F10C2.7NP_506020.2 MFS 10..429 CDD:391944 87/431 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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