DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGlut and C01B4.8

DIOPT Version :9

Sequence 1:NP_001245848.1 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_503682.1 Gene:C01B4.8 / 182055 WormBaseID:WBGene00015272 Length:478 Species:Caenorhabditis elegans


Alignment Length:502 Identity:108/502 - (21%)
Similarity:183/502 - (36%) Gaps:131/502 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 KYCKAECPCMPARY--TIATMACVGFMIAFGMRCNMSAAKLKGEHNGTVFMNWTVAVESHVDSSF 145
            |..|..| |...||  .|.|:.|:..:                :.|...| |:||...|.|... 
 Worm    23 KTSKILC-CNLTRYLILILTLTCLTLL----------------QMNSLAF-NFTVICMSDVSDD- 68

  Fly   146 FWGYLVTQIPG-----------GFIASKFPANKIFGLSIVSSATLHLFVPFAMTLMH-------- 191
               |.:|. |.           ..:.|......:.||.|            ||.|||        
 Worm    69 ---YHITH-PNETHWFEDSNMKSLVFSSMAVGGLLGLLI------------AMPLMHRVGVRLVL 117

  Fly   192 ---------GHV------------VICVRVLQGLFEGVTYPACHGIWRFWAPPMERSR-LATLAF 234
                     |.:            |:.||.||||...:.:.....:...|||..|... ||.|:.
 Worm   118 SICGVFSILGTILFPLAVEWNFFSVLVVRFLQGLGISMVFTVLGSVPTAWAPNNESGTFLAVLSC 182

  Fly   235 SGSYAGVVVGLPLSGLLADAV-GYQAPFYAYGVFGIIWYMFWIWLCFENPRKHPAISIPELKYIE 298
            :..::.|:. :|:||.|.::. |:::.:|.:|:..|::::.:.:...::|..|..:|..||..|.
 Worm   183 AFQWSNVIC-MPISGFLCESSWGWRSIYYLFGIVTIVFFLAFYFFYTDSPTDHRNVSNKELSLIL 246

  Fly   299 KSLGESAHPTMPSLKTTPWREMMRSMPVYAIIVANFCRSWNFYLLVLFQSSFLKHKFGFKVEEAG 363
            :.      .|:...:..|:..:.:...|....::|...:..|..|||:..::|:....|:|...|
 Worm   247 QD------KTVTHKEPVPYLAICKDPCVLVTWMSNIGGNLGFLTLVLYGPTYLREVLNFEVRGTG 305

  Fly   364 FVGSLPHLIMTTIVPFGGMLADHLRKNGILSTTNVRKLFN-CGGFGMEGLFFLFVAHSSTATGAM 427
            |..:||.|:...:....|.|:|.      ....:.|..|. ||.....||...::..::|::   
 Worm   306 FASALPFLLSAAVKSIAGQLSDR------CDFVSERVRFTICGIVARLGLAIGYIGMATTSS--- 361

  Fly   428 FALTCGVAFS-GFAISGYNV------------NHLDIAPRYASIL-MGLSNGIGTLAGIIVPYAL 478
             .|...:||: ..|:||.|:            .|:..|....::: ..:..|...|.|||.|   
 Worm   362 -RLVAQIAFTFSIAVSGLNIMGTVKCLQLRCKQHVHFAVSVIALMAYVIQFGAPILVGIICP--- 422

  Fly   479 DGLIQANPTGCWTTVFTLAACVHLVGCTFYGIFASGELQPW---AEP 522
                 .|....|...|.:...:         :|.:....||   |||
 Worm   423 -----DNTAEQWGWFFLIVGII---------VFVTSAPFPWFTTAEP 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_001245848.1 MFS 98..512 CDD:119392 96/470 (20%)
MFS_1 101..475 CDD:284993 90/430 (21%)
C01B4.8NP_503682.1 MFS 56..443 CDD:391944 92/437 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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