DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGlut and slc-17.9

DIOPT Version :9

Sequence 1:NP_001245848.1 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_001379067.1 Gene:slc-17.9 / 181189 WormBaseID:WBGene00011643 Length:516 Species:Caenorhabditis elegans


Alignment Length:420 Identity:103/420 - (24%)
Similarity:168/420 - (40%) Gaps:37/420 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 GEHNGTVFMNWTVAVESHVDSSFFWGYLVTQIPGGFIASKFPANKIFGLSIVSSATLHLFVPFAM 187
            |::.|::||..|             |:...::.|     |:.........|||:|.|.:....:.
 Worm    90 GQNFGSLFMVIT-------------GWQADRLNG-----KWTIVAAMAFIIVSNAVLPISAGASF 136

  Fly   188 TLMHGHVVICVRVLQGLFEGVTYPACHGIWRFWAPPMERSRLATLAFSGSYAGVVVGLPLSGLLA 252
            .|     |..:|||.|..:.:..||...:...|.||.||.....:..||...|.::.||:.|.|.
 Worm   137 AL-----VFFLRVLTGFGDALLSPASSSLITRWFPPKERPSALGIVTSGRQIGTLIILPIGGWLC 196

  Fly   253 DA------VGYQAPFYAYGVFGIIWYMFWIWLCFENPRKHPAISIPELKYIEKSLGESAHPTMPS 311
            .:      .|:.|.||...|......:.|:....:.|.||..||..|..||.:.:.|.......:
 Worm   197 GSDGSKFLGGWPAIFYLSSVVAAAVLVIWVVFSADKPSKHLCISHNEEAYINRKIEEENIGKRNN 261

  Fly   312 LKTTPWREMMRSMPVYAIIVANFCRSWNFYLLVLFQSSFLKHKFGFKVEEAGFVGSLPHLIMTTI 376
            .|.|||:.:..|..|:..:.|..|..:...:::.|...|.....|......|.|.:||..|:...
 Worm   262 RKNTPWKAIFTSKQVWVAVAALVCHEFPLVIMLQFLPKFFSDVLGLSNTVNGLVSALPMAILFLS 326

  Fly   377 VPFGGMLADHLRKNGILSTTNVRKLFN---CGGFGMEGLFFLFVAHSSTATGAMFALTCGVAFSG 438
            ......||.:|..||.|..|...|:||   ..|.|:.......:::...|..|:..|....||:|
 Worm   327 KCLSASLASYLTANGYLRKTQSCKIFNFIASLGLGICIAATPLMSNLQHAIWAIIILCLANAFAG 391

  Fly   439 FAISGYNVNHLDIAPRYASILMGLSNGIGTLAGIIVPYALDGLIQANPTGCWTTVFTLAACVHLV 503
            ....|.....:.:||.::.|:.||:..:.:...|.....:..:::......||.||.::|.|.::
 Worm   392 LHTPGVLTAIVQLAPAFSGIITGLAFAVASCFSIFNKLLISQILRTGSKHEWTIVFEISAFVAIL 456

  Fly   504 GCTFYGIFASGELQPWAE-----PPAEEQK 528
            ...|:.::.|.|...||.     |...:||
 Worm   457 PTIFFTLWGSAERTEWASNRVSVPKDADQK 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_001245848.1 MFS 98..512 CDD:119392 96/397 (24%)
MFS_1 101..475 CDD:284993 89/360 (25%)
slc-17.9NP_001379067.1 2A0114euk 5..474 CDD:129972 99/406 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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