DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGlut and slc-17.7

DIOPT Version :9

Sequence 1:NP_001245848.1 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_505399.1 Gene:slc-17.7 / 179308 WormBaseID:WBGene00022788 Length:506 Species:Caenorhabditis elegans


Alignment Length:415 Identity:98/415 - (23%)
Similarity:168/415 - (40%) Gaps:24/415 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 EHNGTVFMNWTVAVESHVDSSFFWGYLVTQIPGGFIASKFPANKIF---GLSIVSSATLHLFVPF 185
            ||.||:|  ||....:.:.::|:.|.||..:....:.....|.:..   |::.|....|..||. 
 Worm    81 EHKGTIF--WTSQDRAIIFAAFYAGGLVATLASEVLNRYIGATRSVLYGGIANVVGTFLTPFVA- 142

  Fly   186 AMTLMHGHVVICVRVLQGLFEGVTYPACHGIWRFWAPPMERSRLATLAFSGSYAGVVVGLPLSGL 250
            :.|......:|.:|.:.|..:||.:|....:...|.|..|:|....:|.:|:...||:.:..:..
 Worm   143 SQTNFGTFPIILLRFVMGFGQGVLWPCMLVLIAQWFPVNEKSTALAIATTGNQLSVVIAMFATAE 207

  Fly   251 LADAV-GYQAPFYAYGVFGIIWYMFWIWLCFENP-RKHPAISIPELKYI--EKSLGESAHPTMPS 311
            |.... |:...|:.|.|.||:..:.|..:.:::| .....:|..||.||  |:......||.   
 Worm   208 LCQLPWGWPMAFHVYAVCGIVMCIIWYMMVYDSPCHADKKLSRDELHYITTERVRLRPQHPN--- 269

  Fly   312 LKTTPWREMMRSMPVYAIIVANFCRSWNFYLLVLFQSSFLKHKFGFKVEEAGFVGSLPHLIMTTI 376
                 |..:|:|..|:||..::|..::.....:.:...:.|......:...|...:||.::....
 Worm   270 -----WMALMKSPVVWAIAASSFAHNYVTVGTITYLPLYYKTVLNMSLTSNGLWSALPFVLQLIS 329

  Fly   377 VPFGGMLADHLRKNGILSTTNVRKLFN-CGGFGMEGLFFLFVAHSSTATGAMFALTC-GVAFSGF 439
            ..|...:|:..||........:.|..| ...||:...|.|......:..||...|.| .:.|...
 Worm   330 KVFYAGMAESARKRDWSDINRITKFCNSSASFGIAICFGLLCLCDCSQRGAAIFLICLAMCFVSG 394

  Fly   440 AISGYNVNHLDIAPRYASILMGLSNGIGTLAGIIVPYALDGLIQANPTGCWTTVFTLAACVHLVG 504
            .|.|||.:.:.|||...:.:...|...|.:|..:.||.:....:......|..||.:.|.:.:|.
 Worm   395 YIPGYNTSAVTIAPGQTAAIAAFSRFWGQIASSVAPYHIGAYTKQGTADEWKIVFAVIAAICVVT 459

  Fly   505 CTFYGIFASGELQPW----AEPPAE 525
            ..|:....:..||.|    ::.|.|
 Worm   460 GIFFQCCGTASLQDWDSTHSKAPIE 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_001245848.1 MFS 98..512 CDD:119392 93/396 (23%)
MFS_1 101..475 CDD:284993 85/359 (24%)
slc-17.7NP_505399.1 MFS 31..467 CDD:391944 93/396 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D497052at2759
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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