DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGlut and Y4C6B.3

DIOPT Version :9

Sequence 1:NP_001245848.1 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_001293768.1 Gene:Y4C6B.3 / 177313 WormBaseID:WBGene00021157 Length:459 Species:Caenorhabditis elegans


Alignment Length:431 Identity:98/431 - (22%)
Similarity:184/431 - (42%) Gaps:71/431 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 NGTV--FMNWTVAVESHVDSSFFWGYLVTQIPGGFIASKFPANKI----------FGLSIVSSAT 178
            |||:  ..::|...:.|:    .|.     :..|.|...||.|.:          |...::|:.|
 Worm    49 NGTIRSMYDYTPTEKKHI----LWA-----VSFGTIVGIFPINMLYVQCGARLAFFSAGLLSAMT 104

  Fly   179 LHLFVPFAMTLMHGHVVICVRVLQGLFEGVTYPACHGIWRFWAPPMERS-RLATLAFSGSYAGVV 242
            . .|.|:|.: .....::.:|.|||:.....:.|...|...|||..|.: .:|||....:.:.::
 Worm   105 T-AFTPWAAS-QSMWFLVALRFLQGVAYSADFAAIGIIISKWAPLDETAVFIATLTSFTAISSII 167

  Fly   243 VGLPLSGLLADA-VGYQAPFYAYGVFGIIWYMFWIWLCFENPRKHPAISIPELKYIEKSLGESAH 306
            .. .:||::.:: :|::..||.:....:|.::.|..:...:|..|.::|..||..|:|:..: ||
 Worm   168 TN-GVSGVICESHLGWRWSFYLHAAACLIVFLTWGLVYKNDPSLHKSVSAKELGKIQKNKSD-AH 230

  Fly   307 PTMPSLKTTPWREMMRSMPVYAIIVANFCRSWNFYLLVLFQSSFLKHKFGFKVEEAGF-VGSLPH 370
              |......|:|::..|..|..:.:..|.......|:..:...:.::...|.::..|| :|    
 Worm   231 --MKDSMQIPYRKIFTSPVVITVWLCAFTELSTLILIATYAPIYFRNVLKFDIKMIGFYLG---- 289

  Fly   371 LIMTTIVPFG---GMLADHLRKNGILSTTNVRKLFNCGGFGMEGLFFLFVA-----HSSTATGAM 427
            ||:...:||.   .:|:|   |...:|..:...:||....|..|:.|:...     |:.:|...:
 Worm   290 LILAIHLPFRFVCALLSD---KTRCISEMSKIHIFNTLSVGFVGISFIAFGQIPHEHNLSAVICL 351

  Fly   428 FALTCGVAFS--GFAISGYNVNHLDIAPRYASILMG---LSNGIGTLAG--IIVPYALDGLIQAN 485
            ..|.|..:||  ||    |....|. |.:::||::.   .:..|...:|  ::..:..|   ::|
 Worm   352 GVLECFTSFSSGGF----YKCGTLH-ARQFSSIVISAIQFTKCIALFSGPALVAFFVTD---ESN 408

  Fly   486 PTGCWTTVFTLAACVHLVGCTFYG-----IFASGELQPWAE 521
            .|. |:.||     :.|.|.||:.     |:.:.:...|.|
 Worm   409 QTQ-WSHVF-----MTLAGFTFFANILSYIYFTDQPAEWTE 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_001245848.1 MFS 98..512 CDD:119392 96/420 (23%)
MFS_1 101..475 CDD:284993 85/378 (22%)
Y4C6B.3NP_001293768.1 MFS 15..433 CDD:391944 95/419 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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