DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment VGlut and Y4C6B.3

DIOPT Version :10

Sequence 1:NP_608681.2 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_001293768.1 Gene:Y4C6B.3 / 177313 WormBaseID:WBGene00021157 Length:459 Species:Caenorhabditis elegans


Alignment Length:431 Identity:98/431 - (22%)
Similarity:184/431 - (42%) Gaps:71/431 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 NGTV--FMNWTVAVESHVDSSFFWGYLVTQIPGGFIASKFPANKI----------FGLSIVSSAT 178
            |||:  ..::|...:.|:    .|.     :..|.|...||.|.:          |...::|:.|
 Worm    49 NGTIRSMYDYTPTEKKHI----LWA-----VSFGTIVGIFPINMLYVQCGARLAFFSAGLLSAMT 104

  Fly   179 LHLFVPFAMTLMHGHVVICVRVLQGLFEGVTYPACHGIWRFWAPPMERS-RLATLAFSGSYAGVV 242
            . .|.|:|.: .....::.:|.|||:.....:.|...|...|||..|.: .:|||....:.:.::
 Worm   105 T-AFTPWAAS-QSMWFLVALRFLQGVAYSADFAAIGIIISKWAPLDETAVFIATLTSFTAISSII 167

  Fly   243 VGLPLSGLLADA-VGYQAPFYAYGVFGIIWYMFWIWLCFENPRKHPAISIPELKYIEKSLGESAH 306
            .. .:||::.:: :|::..||.:....:|.::.|..:...:|..|.::|..||..|:|:..: ||
 Worm   168 TN-GVSGVICESHLGWRWSFYLHAAACLIVFLTWGLVYKNDPSLHKSVSAKELGKIQKNKSD-AH 230

  Fly   307 PTMPSLKTTPWREMMRSMPVYAIIVANFCRSWNFYLLVLFQSSFLKHKFGFKVEEAGF-VGSLPH 370
              |......|:|::..|..|..:.:..|.......|:..:...:.::...|.::..|| :|    
 Worm   231 --MKDSMQIPYRKIFTSPVVITVWLCAFTELSTLILIATYAPIYFRNVLKFDIKMIGFYLG---- 289

  Fly   371 LIMTTIVPFG---GMLADHLRKNGILSTTNVRKLFNCGGFGMEGLFFLFVA-----HSSTATGAM 427
            ||:...:||.   .:|:|   |...:|..:...:||....|..|:.|:...     |:.:|...:
 Worm   290 LILAIHLPFRFVCALLSD---KTRCISEMSKIHIFNTLSVGFVGISFIAFGQIPHEHNLSAVICL 351

  Fly   428 FALTCGVAFS--GFAISGYNVNHLDIAPRYASILMG---LSNGIGTLAG--IIVPYALDGLIQAN 485
            ..|.|..:||  ||    |....|. |.:::||::.   .:..|...:|  ::..:..|   ::|
 Worm   352 GVLECFTSFSSGGF----YKCGTLH-ARQFSSIVISAIQFTKCIALFSGPALVAFFVTD---ESN 408

  Fly   486 PTGCWTTVFTLAACVHLVGCTFYG-----IFASGELQPWAE 521
            .|. |:.||     :.|.|.||:.     |:.:.:...|.|
 Worm   409 QTQ-WSHVF-----MTLAGFTFFANILSYIYFTDQPAEWTE 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_608681.2 MFS_SLC17A6_7_8_VGluT 99..512 CDD:340940 96/420 (23%)
Y4C6B.3NP_001293768.1 MFS 15..433 CDD:475125 95/419 (23%)

Return to query results.
Submit another query.