DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGlut and Y4C6B.4

DIOPT Version :9

Sequence 1:NP_001245848.1 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_741396.1 Gene:Y4C6B.4 / 177312 WormBaseID:WBGene00021158 Length:458 Species:Caenorhabditis elegans


Alignment Length:451 Identity:106/451 - (23%)
Similarity:187/451 - (41%) Gaps:59/451 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 CVGFMIA-FGMRCNMSAAKLKGEHNGTV------------FMNWTVAVESHVDSSFFWGYLVTQI 154
            |..::|. |...|.........|.|||:            ::.|.||          :|.:|...
 Worm    25 CSNYIIINFTFICMKDDLSQTTEVNGTLKSIYDYTPTEKKYILWAVA----------FGTMVGTF 79

  Fly   155 PGGFIASKFPAN-KIFGLSIVSSATLHLFVPFAMTLMHGHVVICVRVLQGLFEGVTYPACHGIWR 218
            |...:..|:.|. ..|...::|:.|..| .|:| ......:.:.:|.|||:.....:.|...:..
 Worm    80 PINILYVKYGARIPFFSAGVLSAVTTGL-TPWA-AAQSMWIFVALRFLQGVAYSADFAAIGIVIS 142

  Fly   219 FWAPPMERS-RLATLAFSGSYAGVVVGLPLSGLLADAVGYQAPFYAYGVFGIIWYMFWIWLCFEN 282
            .|||..|.: .:|||....|.|.::.. ..||::.|.:|:|..||.:....::.:..|:.:..::
 Worm   143 KWAPLDETAIFIATLTSFTSIASIITN-GASGVICDTLGWQWSFYFHSATCLLIFCCWVLIYQDD 206

  Fly   283 PRKHPAISIPELKYIEKSLGESAHPTMPSLKTTPWREMMRSMPVYAIIVANFCRSWNFYLLVLFQ 347
            |..|.::|:.||.:|:|:..| ||..: .:| .|::.:..|..|..:.:..|.......|:..:.
 Worm   207 PTFHKSVSVKELGWIQKNKSE-AHIKV-GMK-VPYKAIFTSPVVLTVWLCAFTELSTLILIATYG 268

  Fly   348 SSFLKHKFGFKVEEAGF-VGSLPHLIMTTI-VPFGGMLADHLRKNGILSTTNVRKLFNCGGFGME 410
            ..:.:...||.::..|| :|     ||..| :||..:.|....|...:|......:||....|..
 Worm   269 PIYFRSVLGFDIKIIGFYLG-----IMIAIHLPFRFVCAFLSDKTKCISEMGKIHIFNTLAVGFV 328

  Fly   411 GLFFLFVA-----HSSTATGAMFALTCGVAFS--GFAISGYNVNHLDIAPRYASILMG---LSNG 465
            |:.||...     |:.:|...:..|.|.::|:  ||    |....|. |.:::||::.   .:..
 Worm   329 GISFLIFGKIPPEHNISAVVCLAILECFISFNSGGF----YKCGTLH-ARQFSSIVISAIQFTKC 388

  Fly   466 IGTLAG--IIVPYALDGLIQANPTGCWTTVFTLAACVHLVGCTFYGIFASGELQPWAEPPA 524
            |...:|  ::..:..|   ::|.|. |:.||...|....|......||.:.:...|.|..|
 Worm   389 ISLFSGPALVAFFVTD---ESNQTQ-WSHVFMTLAGFSFVANILSFIFFTDKPAKWTEDDA 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_001245848.1 MFS 98..512 CDD:119392 102/437 (23%)
MFS_1 101..475 CDD:284993 93/400 (23%)
Y4C6B.4NP_741396.1 MFS 15..432 CDD:391944 101/436 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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