DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGlut and vglu-3

DIOPT Version :9

Sequence 1:NP_001245848.1 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_499277.1 Gene:vglu-3 / 176442 WormBaseID:WBGene00011556 Length:544 Species:Caenorhabditis elegans


Alignment Length:467 Identity:185/467 - (39%)
Similarity:263/467 - (56%) Gaps:40/467 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 LRKIDKYCKAECPCMPARYTIATMACVGFMIAFGMRCNMSAAKLK---------GEHNGTVFMNW 133
            |||:             |:.||.:|..||.|:||:|.|...||.:         ||.:...|: |
 Worm    43 LRKV-------------RWQIAILAHFGFAISFGIRSNFGVAKNRMVNNFTDAYGEVHEREFL-W 93

  Fly   134 TVAVESHVDSSFFWGYLVTQIPGGFIASKFPANKIFGLSIVSSATLHLFVPFAMTLMHGHV---V 195
            |.|....::||||:||..:|||.|.:|:||..||||.|.|:.::.:::....:.. .|.:.   |
 Worm    94 TGAEVGMMESSFFYGYAASQIPAGVLAAKFAPNKIFMLGILVASFMNILSAISFN-FHPYTDIFV 157

  Fly   196 ICVRVLQGLFEGVTYPACHGIWRFWAPPMERSRLATLAFSGSYAGVVVGLPLSGLLADAVGYQAP 260
            :.|:.:|||..||.|||.||:|:|||||:|||:|||.||:||..||:.|||.|..|.....:..|
 Worm   158 MVVQAVQGLALGVLYPAMHGVWKFWAPPLERSKLATTAFTGSSVGVMTGLPASAYLVSHFSWSTP 222

  Fly   261 FYAYGVFGIIWYMFWIWLCFENPRKHPAISIPELKYIEKSLGESAHPTMPSLKTTPWREMMRSMP 325
            ||.:||.||||.:.|:::...:|..|..||..|.|.:.:.:|:.|...| ||.|.|||:||.|..
 Worm   223 FYVFGVVGIIWSLIWMYVSSHSPETHGYISDDEKKQVTEKIGDVAVKNM-SLTTLPWRDMMTSSA 286

  Fly   326 VYAIIVANFCRSWNFYLLVLFQSSFLKHKFGFKVEEAGFVGSLPHLIMTTIVPFGGMLADHLRKN 390
            |:|||:..|||||.|:||:..|.:::|......::.:||:...|...|..:....|.|.|:||.:
 Worm   287 VWAIIICTFCRSWGFFLLLGNQLTYMKDVLHIDIKNSGFISIFPQFGMCIVTLATGQLCDYLRSS 351

  Fly   391 GILSTTNVRKLFNCGGFGMEGLFFLFVAHSSTATGAMFALTCGVAFSGFAISGYNVNHLDIAPRY 455
            |.:||..|||..|..||.:|.:....:|.......|:..|......||..:||:||||.||||||
 Worm   352 GKMSTEAVRKSVNTFGFTVEAMMLGCLAFVRDPVIAVTCLVIACTGSGSVLSGFNVNHFDIAPRY 416

  Fly   456 ASILMGLSNGIGTLAGIIVPYALDGLI-----QANPTGCWTTVFTLAACVHLVGCTFYGIFASGE 515
            |.||||::||:|.:||:      .|::     ..||.| |..||.||..:.:.|..|:.|||.|:
 Worm   417 APILMGIANGLGAVAGV------GGMVTNTVTYQNPDG-WKWVFLLAMAIDIFGVIFFLIFAKGD 474

  Fly   516 LQPWAEPPAEEQ 527
            :.|||..|.:|:
 Worm   475 VLPWAREPEKEE 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_001245848.1 MFS 98..512 CDD:119392 173/430 (40%)
MFS_1 101..475 CDD:284993 159/385 (41%)
vglu-3NP_499277.1 2A0114euk 47..485 CDD:129972 181/447 (40%)
MFS 52..471 CDD:119392 171/428 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53923
OrthoDB 1 1.010 - - D144672at33208
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11662
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X201
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
77.030

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