DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGlut and vglu-2

DIOPT Version :9

Sequence 1:NP_001245848.1 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_499276.1 Gene:vglu-2 / 176441 WormBaseID:WBGene00010755 Length:573 Species:Caenorhabditis elegans


Alignment Length:478 Identity:188/478 - (39%)
Similarity:270/478 - (56%) Gaps:44/478 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 SFEEIERPPLRKIDKYCKAECPCMPARYTIATMACVGFMIAFGMRCNMSAAKLK---------GE 124
            |.:|..:..|||:             |:.||.:|..||.|:||:|.|...||.:         ||
 Worm    34 SLQEDNKFFLRKV-------------RWQIALLAHFGFAISFGIRSNFGVAKNRMINNFTDAYGE 85

  Fly   125 -HNGTVFMNWTVAVESHVDSSFFWGYLVTQIPGGFIASKFPANKIFGLSIVSSATLHL------- 181
             |....|  ||......::||||:||..:|||.|.||:||..||:|.|.|:.::.|::       
 Worm    86 VHEKEFF--WTGTEVGMMESSFFYGYAASQIPAGVIAAKFAPNKLFMLGILFASLLNIVTAICLN 148

  Fly   182 FVPFAMTLMHGHVVICVRVLQGLFEGVTYPACHGIWRFWAPPMERSRLATLAFSGSYAGVVVGLP 246
            |.||....     |:.::|:|||..||.|||.||:|::||||:|||:|||..|:|:..||:||||
 Worm   149 FHPFTDIF-----VMVIQVMQGLALGVCYPAMHGVWKYWAPPLERSKLATTTFTGASVGVMVGLP 208

  Fly   247 LSGLLADAVGYQAPFYAYGVFGIIWYMFWIWLCFENPRKHPAISIPELKYIEKSLGESAHPTMPS 311
            .|..|.....:..|||.:|..||:|.:.||::...:|..|..||..|.|||.:.:|..|...| :
 Worm   209 ASAYLVSHFSWSTPFYVFGALGIVWSILWIYVSGTSPETHGYISADEKKYITEKVGSVAVKNM-T 272

  Fly   312 LKTTPWREMMRSMPVYAIIVANFCRSWNFYLLVLFQSSFLKHKFGFKVEEAGFVGSLPHLIMTTI 376
            |.|.|||:||.|..|:|||:.:|||||:|:||:..|.:::|......::.:|.:...|.|.|..:
 Worm   273 LTTLPWRDMMTSTAVWAIIICSFCRSWSFFLLLGNQLTYMKDVLHIDIKNSGLIAIFPQLGMCIV 337

  Fly   377 VPFGGMLADHLRKNGILSTTNVRKLFNCGGFGMEGLFFLFVAHSSTATGAMFALTCGVAFSGFAI 441
            ....|.|:|:||.:|.:||..|||..|..||.:|.:....:|.......|:..|....:.:|..:
 Worm   338 TLTSGQLSDYLRSSGKMSTEAVRKSVNTFGFTVEAVMLGCLAFVRDPVIAVTFLIIACSGAGAVL 402

  Fly   442 SGYNVNHLDIAPRYASILMGLSNGIGTLAGI--IVPYALDGLIQANPTGCWTTVFTLAACVHLVG 504
            ||:||||.|||||:|.||||::||:|.:||:  ||   .:.|...||.| |..||.||..:.:.|
 Worm   403 SGFNVNHFDIAPRHAPILMGIANGLGAIAGVGGIV---TNSLTYQNPDG-WQWVFLLAMSIDIFG 463

  Fly   505 CTFYGIFASGELQPWAEPPAEEQ 527
            ..|:.|||.|::.|||..|.:|:
 Worm   464 IIFFLIFAKGDVLPWAREPEKEE 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_001245848.1 MFS 98..512 CDD:119392 174/432 (40%)
MFS_1 101..475 CDD:284993 159/392 (41%)
vglu-2NP_499276.1 MFS 51..458 CDD:391944 170/418 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53923
OrthoDB 1 1.010 - - D144672at33208
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11662
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X201
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.030

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