DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGlut and slc-17.2

DIOPT Version :10

Sequence 1:NP_608681.2 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_499065.1 Gene:slc-17.2 / 176317 WormBaseID:WBGene00008000 Length:493 Species:Caenorhabditis elegans


Alignment Length:475 Identity:159/475 - (33%)
Similarity:239/475 - (50%) Gaps:45/475 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 RYTIATMACVGFMIAFGMRCNMSAAKL-----------------------KGEHNGTVF--MNWT 134
            |:.::.:...|.::.:.||.|||.|.:                       ..|.|.:|.  .:|.
 Worm    15 RFALSLVMFFGCLVTYMMRTNMSFAVVCMVNENKTDTGVEKVSRCGKEMTPVESNSSVIGEFDWD 79

  Fly   135 VAVESHVDSSFFWGYLVTQIPGGFIASKFPANKIFGLSIVSSATLHLFVPFAMTLMHGHVVICVR 199
            ......|.||||:||:.:||.||.:||::...::..::|:.||.|.|..|.|..... :.:..:|
 Worm    80 KQTTGMVLSSFFYGYIGSQIIGGHLASRYGGKRVVFVTILGSALLTLLNPVAARTSE-YALAILR 143

  Fly   200 VLQGLFEGVTYPACHGIWRFWAPPMERSRLATLAFSGSYAGVVVGLPLSGLLAD---AVGYQAPF 261
            ...|..:|.|:||.|.:|..|.||:|.|.|..:.::|:..|.|:.|||||.|.:   ..|:.:.|
 Worm   144 AAIGFLQGATFPAMHTMWSVWGPPLELSVLTGVTYAGAQIGNVIVLPLSGFLCEYGFDGGWPSIF 208

  Fly   262 YAYGVFGIIWYMFWIWLCFENPRKHPAISIPELKYI----EKSLGESAHPTMPSLKTTPWREMMR 322
            |..||||::|...|.::..:.|..||.|:..|.:||    |.|:|:.. ..:||   |||.:::.
 Worm   209 YIIGVFGVLWTAVWWYVSSDKPATHPRITPEEKQYIVTAVEASMGKDT-GKVPS---TPWIKILT 269

  Fly   323 SMPVYAIIVANFCRSWNFYLLVLFQSSFLKHKFGFKVEEAGFVGSLPHLIMTTIVPFGGMLADHL 387
            |..|:|....:|...|..|.:::...||||...|..:...|.|.|:|::.....:..||:|||.|
 Worm   270 SPAVWACWAGHFAGDWGAYTMLVSLPSFLKDVLGLNLSSLGAVASIPYIAYFLAINAGGVLADTL 334

  Fly   388 RKNGILSTTNVRKLFNCGGFGMEGLFFLFVAHSSTATG----AMFALTCGVAFSGFAISGYNVNH 448
            |..|||||.|.|:.........:|:|  .||......|    .:..:|||:|.||...:|:.||:
 Worm   335 RSKGILSTLNTRRAAMLVALIGQGIF--LVASGYCGCGQDVLVIIFITCGMAISGLQYAGFVVNY 397

  Fly   449 LDIAPRYASILMGLSNGIGTLAGIIVPYALDGLIQANPT-GCWTTVFTLAACVHLVGCTFYGIFA 512
            |:|||.::..:||..|.|..|||||.| |:...:..|.| ..|..|..|.|.:..:|...:.|||
 Worm   398 LEIAPPFSGTVMGTGNTISALAGIISP-AVSSYLTPNGTQEEWQMVLWLTAGILTIGALLFSIFA 461

  Fly   513 SGELQPWAEPPAEEQKVWAP 532
            |||:||||:..|||....||
 Worm   462 SGEVQPWAKLTAEEGHEMAP 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_608681.2 MFS_SLC17A6_7_8_VGluT 99..512 CDD:340940 144/449 (32%)
slc-17.2NP_499065.1 MFS_SLC17 19..461 CDD:340876 144/449 (32%)

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