DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGlut and T27D12.1

DIOPT Version :9

Sequence 1:NP_001245848.1 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_001254320.1 Gene:T27D12.1 / 174820 WormBaseID:WBGene00012085 Length:502 Species:Caenorhabditis elegans


Alignment Length:360 Identity:91/360 - (25%)
Similarity:156/360 - (43%) Gaps:25/360 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 GLSIVSSATLHLFVPFAMTLMHGHVVICVRVLQGLFEGVTYPACHGIWRFWAPPMERSRLATLAF 234
            ||.|:|:.:. |.:|.::. |..:..:.||.|||......:|........|:...:.....:...
 Worm   120 GLGILSAVST-LLIPLSIR-MGFYYFLAVRFLQGFAFAANFPVIGSFCAKWSYFKQNGLFVSSLV 182

  Fly   235 SGSYAGVVVGLPLSGLLADAVGYQAPFYAYGVFGIIWYMFWIWLCFENPRKHPAISIPELKYIEK 299
            :.......:.:|.||.|..|..:.:.|||:|...::.::.:......:|:|||.:...|||.|  
 Worm   183 AYVQLSPAITMPASGALCSAFKWPSIFYAHGAVSLLLFVTYALFYRNSPQKHPFVGNVELKKI-- 245

  Fly   300 SLGESAHPTMPSLKTTPWREMMRSMPVYAIIVA---NF-CRSWNFYLLVLFQSSFLKHKFGFKVE 360
            |:|:.|.....:||..|:..::::..::|:.||   || |.:    ::.||...:|....||.|.
 Worm   246 SIGKIAAVDKRALKKVPYGPILKTPAIWAVWVAAIGNFTCVN----MMFLFSPIYLSKVLGFPVH 306

  Fly   361 EAGFVGSLPHLIMTTIVPFGGMLADHLRKNGILSTTNVRKLFNCGGF-GMEG----LFFLFVAHS 420
            ..|...::|..:..:.....|..:|.|.   .||.....:|||...| |..|    |.|:...|.
 Worm   307 STGITAAIPPFLQFSSKLICGAASDRLT---CLSEGVKFRLFNTLAFVGSAGFLCVLAFMGDEHK 368

  Fly   421 STATGAMFALTCGVAFSGFAISGYNVNHLDIAPRYASILMG-LSNGIGTLAGIIVPYALDGLIQA 484
               ...|..|.|..|..|....|:......::.:|:..:.| :|.|| |:..:|||:.::.|...
 Worm   369 ---RNNMIVLGCAAAMLGATTGGFFKAGPVLSKQYSHFVTGNISLGI-TITMLIVPFFVNALTPN 429

  Fly   485 NPTGCWTTVFTLAACVHLVGCTFYGIFASGELQPW 519
            |....|..||.:...|.::...|:.||..|:...|
 Worm   430 NTQEEWKYVFLITGAVMVITNIFFVIFVRGDPCEW 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_001245848.1 MFS 98..512 CDD:119392 88/351 (25%)
MFS_1 101..475 CDD:284993 78/314 (25%)
T27D12.1NP_001254320.1 MFS 56..456 CDD:391944 87/350 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D497052at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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