DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGlut and slc-17.6

DIOPT Version :9

Sequence 1:NP_001245848.1 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_490947.2 Gene:slc-17.6 / 171781 WormBaseID:WBGene00017398 Length:546 Species:Caenorhabditis elegans


Alignment Length:442 Identity:100/442 - (22%)
Similarity:194/442 - (43%) Gaps:23/442 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 IATMACVGFMI---AFGMRCNMSAAKLKGEHNGT----VFMNWTVAVESHVDSSFFWGYLVTQIP 155
            :.:.|||.|.:   .||    |:...:....|||    :.|.|:...::::.:||:.|..:...|
 Worm    32 LISAACVVFGLMRTCFG----MAMVDIVRSGNGTFHPDLHMEWSGDEQANIHTSFYIGAFIAVFP 92

  Fly   156 GGFIASKFPANKIFGLSIVSSATLHLFVPFAMTLMHGHV-VICVRVLQGLFEGVTYPACHGIWRF 219
            ..|:|.|.....:...:::.:....|..||:...:..:. |..:|::.|...|...||...:...
 Worm    93 SEFLAKKLGPKNLLSFALLLNIFGSLLTPFSAIYLRSYFPVAAIRLIMGFGYGFVIPAGSVLISS 157

  Fly   220 WAPPMERSRLATLAFSGSYAGVVVGLPLSGLLADA---VGYQAPFYAYGVFGIIWYMFWIWLCFE 281
            |.|..|:|....:..:|:..|:.|.:.|:..|...   .|:...|..||:.|.::.:.|.....:
 Worm   158 WFPLSEKSTAMAIFTTGNQIGIAVSMFLTAKLCQLHFFEGWPLVFIVYGLIGAVFLVIWHVRLAD 222

  Fly   282 NPRKHPAISIPELKYIEKSLGESAHPTMPSLKTTPWREMMRSMPVYAIIVANFCRSWNFYLLVLF 346
            .||:...|:..||.|| |...:..:.....::.||:.:::.:..|.||...:|.:|:....||.:
 Worm   223 KPRESKYITATELTYI-KGGKQRRNRAETIVRATPYMKIILNGCVCAICACSFAQSFVLVALVTY 286

  Fly   347 QSSFLKHKFGFKVEEAGFVGSLPHLI-MTTIVPFGGMLADHLRKNGILSTTNVRKLFNCGGFGME 410
            ...:.:..|...:...|...|||..| |.|.:.| .::||.:::..: :.|.|.|:.|.......
 Worm   287 LPKYNQIAFKMNLTHNGIWSSLPFFIQMITKLLF-AIIADKVKQRKV-NATAVTKVSNAIASFAS 349

  Fly   411 GLFFLFVAHSSTATGAMFALTCGVAFSGFA--ISGYNVNHLDIAPRYASILMGLSNGIGTLAGII 473
            .:|.:..|:....:..:..|:..|:.:.|:  :.|||.:.:.:||::.:.:...:.....:|..:
 Worm   350 AIFIVIAAYGPFDSAELVQLSIIVSMAAFSAYVPGYNTSIVTVAPQFTAFISSYAQLYAQIASTL 414

  Fly   474 VPYALDGLIQANPTGCWTTVF-TLAACVHLVGCTFYGIFASGELQPWAEPPA 524
            .|..:..:........|...| :||..:.:.|..|. ||..|..:||.|.|:
 Worm   415 APIVIGRITSHGTIYEWKCAFYSLAGVLAVTGLIFQ-IFGHGRTEPWGETPS 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_001245848.1 MFS 98..512 CDD:119392 94/428 (22%)
MFS_1 101..475 CDD:284993 86/387 (22%)
slc-17.6NP_490947.2 MFS 30..453 CDD:391944 94/428 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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