DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGlut and Slc17a1

DIOPT Version :9

Sequence 1:NP_001245848.1 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_598238.2 Gene:Slc17a1 / 171080 RGDID:620099 Length:465 Species:Rattus norvegicus


Alignment Length:466 Identity:147/466 - (31%)
Similarity:232/466 - (49%) Gaps:38/466 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 RKIDKYCKAECPCMPARYTIATM------------ACVGF-MIAFGMR------CNMSAAKLKGE 124
            :|:..:|.       .||.:|.:            .|:.. |:|...:      .|.|.|::...
  Rat     8 KKVPGFCS-------FRYGLAILLHFCNIVIMAQRVCLNLTMVAMVNKTEPPHLSNKSVAEMLDN 65

  Fly   125 HNGTVFMNWTVAVESHVDSSFFWGYLVTQIPGGFIASKFPANKIFGLSIVSSATLHLFVPFAMTL 189
            ....|. :|::.::..:.||.|.|.:|.|:|.|:::..:|..||.|.|:..|:.|.|.:|.|..:
  Rat    66 VKNPVH-SWSLDIQGLILSSVFLGMVVIQVPVGYLSGAYPMKKIIGSSLFLSSVLSLLIPPAAQV 129

  Fly   190 MHGHVVICVRVLQGLFEGVTYPACHGIWRFWAPPMERSRLATLAFSGSYAGVVVGLPLSGLLADA 254
            ....|::| |||||:.:|......||||..||||:||.||.::..||...|..:.|.:||.:.|.
  Rat   130 GAALVIVC-RVLQGIAQGAVSTGQHGIWVKWAPPLERGRLTSMTLSGFVMGPFIALLVSGFICDL 193

  Fly   255 VGYQAPFYAYGVFGIIWYMFWIWLCFENPRKHPAISIPELKYIEKSLGESAHPTMPSLKTTPWRE 319
            :|:...||.:|:.|.:..:||..|.|::|..||.:|..|..||..||.:..|....||   |.:.
  Rat   194 LGWPMVFYIFGIVGCVLSLFWFILFFDDPNNHPYMSSSEKDYITSSLMQQVHSGRQSL---PIKA 255

  Fly   320 MMRSMPVYAIIVANFCRSWNFYLLVLFQSSFLKHKFGFKVEEAGFVGSLPHLIMTTIVPFGGMLA 384
            |::|:|::|||:.:|...|:..|||.:..:|:.......|.|.|.:.|||:|:........|.::
  Rat   256 MLKSLPLWAIILNSFAFIWSNNLLVTYTPTFISTTLHVNVRENGLLSSLPYLLAYICGIVAGQMS 320

  Fly   385 DHLRKNGILSTTNVRKLFNCGGFGMEGLF---FLFVAHSSTATGAMFALTCGVAFSGFAISGYNV 446
            |.|....|.|...|||||...|.....:|   .|:::::..:|  :..||...:...|:..|..:
  Rat   321 DFLLSRKIFSVVAVRKLFTTLGIFCPVIFVVCLLYLSYNFYST--VIFLTLANSTLSFSFCGQLI 383

  Fly   447 NHLDIAPRYASILMGLSNGIGTLAGIIVPYALDGLI-QANPTGCWTTVFTLAACVHLVGCTFYGI 510
            |.|||||||...|..::..||...|:| ...|.||| ..:|...|...|.|.|.:::....||.:
  Rat   384 NALDIAPRYYGFLKAVTALIGIFGGLI-SSTLAGLILNQDPEYAWHKNFFLMAGINVTCLAFYLL 447

  Fly   511 FASGELQPWAE 521
            ||.|::|.||:
  Rat   448 FAKGDIQDWAK 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_001245848.1 MFS 98..512 CDD:119392 137/436 (31%)
MFS_1 101..475 CDD:284993 125/395 (32%)
Slc17a1NP_598238.2 2A0114euk 1..464 CDD:129972 147/466 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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