DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment VGlut and Slc37a4

DIOPT Version :9

Sequence 1:NP_001245848.1 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_001344658.1 Gene:Slc37a4 / 14385 MGIID:1316650 Length:450 Species:Mus musculus


Alignment Length:397 Identity:84/397 - (21%)
Similarity:150/397 - (37%) Gaps:61/397 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 VDSSFFWGYLVTQIPGGFIASKFPANKIFGLSIVSSATLHLFVPFAMTLMHGHVVICVRVLQGLF 205
            :.||....|.:::...|.::.:..|..:|...::....:::...::.|:   .....:..|.||.
Mouse    52 ITSSQSAAYAISKFVSGVLSDQMSARWLFSSGLLLVGLVNVVFSWSSTV---SAFAALWFLNGLA 113

  Fly   206 EGVTYPACHGIWRFWAPPME-RSRLATLAFSGSYAGVVVGLPLSGLLADAVGYQAPFYAYGVFGI 269
            :|:.:|.|..|.|.|..|.: .:..|.|:.|.:.|| .:|..|:.:||.:..:::.....|...:
Mouse   114 QGLGWPPCGKILRKWFEPSQFGTWWAVLSTSMNLAG-SLGPILATILAQSYSWRSTLALSGALCV 177

  Fly   270 IWYMFWIWLCFENPRKHPAISIPELKYIEKSLGESAHPTMPSLKTTPWREMMRSMPVYAIIVANF 334
            :...|.:.|....|......::.......|........|:..|..:|:..::.:..:....|...
Mouse   178 VVSFFCLLLIHNEPADVGLRNLDPAPSKGKKGSSKEESTLQDLLLSPYLWVLSTGYLVVFGVKTC 242

  Fly   335 CRSWNFYLLV--LFQSSFLKHKFGFKVEEAGFVGSLPHLIMTTIVPFGGMLADH-LRKNGILSTT 396
            |..|..:.|:  ..||:.:...:...:|..|.|||:.          .|.|:|. :.|.|:....
Mouse   243 CTDWGQFFLIQERGQSALVGSSYISALEVGGLVGSIA----------AGYLSDRAMAKAGLSLYG 297

  Fly   397 NVRK-LFNCGGFGMEGLFFLF-VAHSSTA----------------TG----AMFALTCGVAFSGF 439
            |.|. |......||....||| |..:|.:                ||    .::.|..|..| ||
Mouse   298 NPRHGLLLLMMAGMAASMFLFRVTVTSDSPKDAFWTPALHPLAELTGFTEHEIWILVLGAVF-GF 361

  Fly   440 AISG----YNVNHLDIAPRYASILMGLSNGI-GTLAGIIVPYALDGLIQANPTG------CWTTV 493
            :..|    :.|...:.||   ..|.|.|:.| |.:|.:      .|.:...|..      .|:|.
Mouse   362 SSYGPIALFGVIANESAP---PNLCGTSHAIVGLMANV------GGFLAGLPFSTIAKHYSWSTA 417

  Fly   494 FTLAACV 500
            |.:|..|
Mouse   418 FWVAEVV 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_001245848.1 MFS 98..512 CDD:119392 84/397 (21%)
MFS_1 101..475 CDD:284993 77/364 (21%)
Slc37a4NP_001344658.1 MFS_SLC37A4 10..438 CDD:340901 84/397 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838813
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.