DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGlut and Slc17a3

DIOPT Version :9

Sequence 1:NP_001245848.1 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_598830.2 Gene:Slc17a3 / 105355 MGIID:2389216 Length:498 Species:Mus musculus


Alignment Length:492 Identity:137/492 - (27%)
Similarity:229/492 - (46%) Gaps:56/492 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 ERPPLRKIDKYCKAECPCMPARYTIA--------TMACVGFMIAFGM-----------RCNMSAA 119
            ::.|..|:...|.       .||.||        |:.....:|:..|           ..|.|..
Mouse    24 KKTPALKVPSLCS-------MRYGIAFVTHFCNFTLMAQNSIISITMVAMVNNTDHPPHLNSSTE 81

  Fly   120 KLKG-----EHNGTVFM-------NWTVAVESHVDSSFFWGYLVTQIPGGFIASKFPANKIFGLS 172
            :|..     :|..:..:       ||:...:..:.||..:|.::.|.|||::|.|....|:.|::
Mouse    82 QLPAGLSGDQHEASKHLPIKAPVYNWSPQTQGIIFSSVQYGMILMQGPGGYLAGKIGTKKVVGIA 146

  Fly   173 IVSSATLHLFVPFAMTLMHGHV-VICVRVLQGLFEGVTYPACHGIWRFWAPPMERSRLATLAFSG 236
            ::.|:.|.|.:|.|..|  |.| .:..|.:|||.:|..|.....:|:.||||.|||||.|:|.||
Mouse   147 LLGSSLLTLCIPLAANL--GLVFFLATRAVQGLMQGTGYGGQFALWQKWAPPNERSRLCTIALSG 209

  Fly   237 SYAGVVVGLPLSGLLADAVGYQAPFYAYGVFGIIWYMFWIWLCFENPRKHPAISIPELKYIEKSL 301
            ...|:...|.:.|::::|:|:...||::|..|::..:.|..|.:::|..||.||.||.:||..||
Mouse   210 MTLGIFTVLLVGGIISEALGWPFVFYSFGGGGVLCSLLWFILIYDDPVSHPWISGPEREYILSSL 274

  Fly   302 GESAHPTMPSLKTTPWREMMRSMPVYAIIVANFCRSWNFYLLVLFQSSFLKHKFGFKVEEAGFVG 366
            .:........|   |.:.|::|:|::::.:......|.....:::..:::...|...:.:.||:.
Mouse   275 NQQFSSEEQPL---PIKAMLKSLPLWSMCLCTMTHQWLVNTFIMYTPTYISSVFKVNIRDNGFLS 336

  Fly   367 SLPHLIMTTIVPFGGMLADH-LRKNGILSTTNVRKLFNCGGFGMEGLFFL---FVAHSSTATGAM 427
            |||.::...:...||.|||. |.||..|.|  |||.....|.........   ::..|...|...
Mouse   337 SLPFIVAWVLGILGGWLADFLLSKNFRLIT--VRKFITLLGNAPPAALVAALPYIQSSYITTIIF 399

  Fly   428 FALTCGVAFSGFAISGYNVNHLDIAPRYASILMGLSNGIGTLAGIIVPYALDGLIQANPTGCWTT 492
            ..::||:.  ..:.:|..:|.|||||||||.|||.|.|:...:.::||......:..:....|..
Mouse   400 LTISCGLC--PLSQAGIYINALDIAPRYASFLMGTSRGLAHSSAVLVPIVAGFFLSQDSEFGWRN 462

  Fly   493 VFTLAACVHLVGCTFYGIFASGELQPWAEPPAEEQKV 529
            .|.:...|:|:|...|.:|...::|.|    |.|:|:
Mouse   463 FFFVVFAVNLLGLIIYLVFGKADVQEW----ARERKL 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_001245848.1 MFS 98..512 CDD:119392 126/449 (28%)
MFS_1 101..475 CDD:284993 115/401 (29%)
Slc17a3NP_598830.2 MFS_SLC17 42..482 CDD:340876 125/448 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838816
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D497052at2759
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.850

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