DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGlut and slc17a6

DIOPT Version :9

Sequence 1:NP_001245848.1 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:XP_004913390.1 Gene:slc17a6 / 101730310 XenbaseID:XB-GENE-1011394 Length:583 Species:Xenopus tropicalis


Alignment Length:569 Identity:268/569 - (47%)
Similarity:354/569 - (62%) Gaps:52/569 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 DDDRPDSPASFEEIERPPLRKIDKYCKAECPCMPARYTIATMACVGFMIAFGMRCNMSAAKLKGE 124
            :|.:|...|.    ::|||      |...|..:|.||.||.|:.:||.|:||:|||:..|.:...
 Frog    45 EDGKPVEVAE----KKPPL------CDCTCFGLPRRYIIAIMSGLGFCISFGIRCNLGVAIVDMV 99

  Fly   125 HNGTVF-----------MNWTVAVESHVDSSFFWGYLVTQIPGGFIASKFPANKIFGLSIVSSAT 178
            :|.|:.           .||...:...:..||||||:|||||||:|||:..||::||.:||.::|
 Frog   100 NNSTIHHGGKIIKEKAKFNWDPEIVGMIHGSFFWGYIVTQIPGGYIASRLAANRVFGAAIVLTST 164

  Fly   179 LHLFVPFAMTLMHGHVVICVRVLQGLFEGVTYPACHGIWRFWAPPMERSRLATLAFSGSYAGVVV 243
            |::.:|.|..:.:| .||.||:||||.||||||||||||..||||:|||||||.:|.|||||.|:
 Frog   165 LNMLIPSAARVHYG-CVIFVRILQGLVEGVTYPACHGIWSKWAPPLERSRLATTSFCGSYAGAVI 228

  Fly   244 GLPLSGLLADAVGYQAPFYAYGVFGIIWYMFWIWLCFENPRKHPAISIPELKYIEKSLGESAHPT 308
            .:||:|:|....|:.:.||.||.||::||:|||.:.:|:|.|||.|:..|..|||:|:||||:..
 Frog   229 AMPLAGILVQYTGWSSVFYVYGCFGLVWYLFWILVSYESPAKHPTITDEERNYIEESIGESANIL 293

  Fly   309 MPSLK-TTPWREMMRSMPVYAIIVANFCRSWNFYLLVLFQSSFLKHKFGFKVEEAGFVGSLPHLI 372
            .|..| .||||:...||||||||||||||||.||||::.|.::.:..|||::.:.|.:.::|||:
 Frog   294 GPVEKFKTPWRKFFTSMPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFEISKVGMLSAVPHLV 358

  Fly   373 MTTIVPFGGMLADHLRKNGILSTTNVRKLFNCGGFGMEGLFFLFVAHSSTATGAMFALTCGVAFS 437
            ||.|||.||.:||.||...|||||.|||:.||||||||....|.|.:|.:...|:..|...|.||
 Frog   359 MTIIVPIGGQIADFLRSKQILSTTTVRKIMNCGGFGMEATLLLVVGYSHSKGVAISFLVLAVGFS 423

  Fly   438 GFAISGYNVNHLDIAPRYASILMGLSNGIGTLAGIIVPYALDGLIQANPTGCWTTVFTLAACVHL 502
            ||||||:|||||||||||||||||:|||:|||:|::.|..:..:.:......|..||.:||.||.
 Frog   424 GFAISGFNVNHLDIAPRYASILMGISNGVGTLSGMVCPLIVGAMTKHKSREEWQYVFLIAALVHY 488

  Fly   503 VGCTFYGIFASGELQPWAEPPAEEQKVWAPPPGAITNTDPSQAGMLGDYMKETSFGAPEYTEQSQ 567
            .|..|||||||||.||||:|   ||            |...:.|.:.:  .|.:..|.:.: |:.
 Frog   489 GGVIFYGIFASGEKQPWADP---EQ------------TSDEKCGFINE--DELAEEAGDIS-QNY 535

  Fly   568 MQQSTAISYGATGHVANNPFAMASGAPPIAEEDAPPTYGDVTNPGQYGY 616
            :...||.|||||..       |.:|.|...|:......||    ||..|
 Frog   536 INYGTAKSYGATTQ-------MNTGWPNGWEKREEGVQGD----GQESY 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_001245848.1 MFS 98..512 CDD:119392 224/425 (53%)
MFS_1 101..475 CDD:284993 209/385 (54%)
slc17a6XP_004913390.1 MFS_SLC17A6_7_8_VGluT 74..498 CDD:340940 223/424 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 441 1.000 Domainoid score I539
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H121617
Inparanoid 1 1.050 505 1.000 Inparanoid score I1307
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D144672at33208
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 1 1.000 - - otm49291
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X201
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.060

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