DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGlut and slc17a6b

DIOPT Version :10

Sequence 1:NP_608681.2 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_001122293.1 Gene:slc17a6b / 100149756 ZFINID:ZDB-GENE-030616-554 Length:584 Species:Danio rerio


Alignment Length:614 Identity:279/614 - (45%)
Similarity:358/614 - (58%) Gaps:73/614 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 EMEGGDREG----RGPGGGHAYD--DDDDRPDSPASFEEIERPPLRKIDKYCKAECPC--MPARY 96
            |..|..:||    .|...||.|.  :...:|.......|..||......|....:|.|  :|.||
Zfish     6 EPAGFSKEGLKQLAGKTLGHVYRVIEKRQKPGENIELTEDGRPAQINERKAPLCDCTCFGLPRRY 70

  Fly    97 TIATMACVGFMIAFGMRCNMSAAKLKGEHNGTVFM------------NWTVAVESHVDSSFFWGY 149
            .||.|:.:||.|:||:|||:..|.:...:|.|:.:            ||.......:..||||||
Zfish    71 IIAIMSGLGFCISFGIRCNLGVAIVSMVNNSTIHLNGKIIIKEKAKFNWDPETVGLIHGSFFWGY 135

  Fly   150 LVTQIPGGFIASKFPANKIFGLSIVSSATLHLFVPFAMTLMHGH--VVICVRVLQGLFEGVTYPA 212
            :|||||||:|:|:..||::||.:|:.::||::|:|.|   ..||  .||.||:||||.|||||||
Zfish   136 IVTQIPGGYISSRLAANRVFGAAILLTSTLNMFIPSA---ARGHYGCVIFVRILQGLVEGVTYPA 197

  Fly   213 CHGIWRFWAPPMERSRLATLAFSGSYAGVVVGLPLSGLLADAVGYQAPFYAYGVFGIIWYMFWIW 277
            |||||..||||:|||||||.:|.|||||.|:.:||:|:|....|:.:.||.||.|||.||||||.
Zfish   198 CHGIWSKWAPPLERSRLATTSFCGSYAGAVIAMPLAGILVQYTGWSSVFYVYGCFGIFWYMFWIL 262

  Fly   278 LCFENPRKHPAISIPELKYIEKSLGESAHPTMPSLK-TTPWREMMRSMPVYAIIVANFCRSWNFY 341
            :.:|:|.:||.|:..|..|||:|:||||....|:.| .||||:...||||||||||||||||.||
Zfish   263 VSYESPAEHPTITAEERCYIEESIGESAKLLGPADKFKTPWRKFFTSMPVYAIIVANFCRSWTFY 327

  Fly   342 LLVLFQSSFLKHKFGFKVEEAGFVGSLPHLIMTTIVPFGGMLADHLRKNGILSTTNVRKLFNCGG 406
            ||::.|.::.:..|||::.:.|.:.:||||:||.|||.||.||||||...|||||.|||:.||||
Zfish   328 LLLISQPAYFEEVFGFEISKVGMLSALPHLVMTIIVPIGGQLADHLRSKNILSTTTVRKIMNCGG 392

  Fly   407 FGMEGLFFLFVAHSSTATGAMFALTCGVAFSGFAISGYNVNHLDIAPRYASILMGLSNGIGTLAG 471
            ||||....|.|.:|.:...|:..|...|.||||||||:|||||||||||||||||:|||:|||:|
Zfish   393 FGMEATLLLIVGYSHSKGVAISFLVLAVGFSGFAISGFNVNHLDIAPRYASILMGISNGVGTLSG 457

  Fly   472 IIVPYALDGLIQANPTGCWTTVFTLAACVHLVGCTFYGIFASGELQPWAEPPAEEQKVWAPPPGA 536
            ::.|..:..:.:......|..||.:|:.||..|..|||||||||.||||:|..            
Zfish   458 MVCPLIVGAMTKHKTREEWQYVFLIASLVHYGGVIFYGIFASGEKQPWADPEL------------ 510

  Fly   537 ITNTDPSQAGML--GDYMKET--------SFGAPEYTEQSQMQQSTAISYGATGHVANNPFAMAS 591
               |...:.|.:  .:..:||        :.|||            |.|||||..:..   ..|.
Zfish   511 ---TSDEKCGFIDEDELAEETGDITQSYGALGAP------------AKSYGATTQLNG---GWAE 557

  Fly   592 GAPPIAEEDAPPTY-GDVTNPGQYGYTQG 619
            |      .|....| .|....|.|||.||
Zfish   558 G------WDKREEYVQDGVEEGGYGYRQG 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_608681.2 MFS_SLC17A6_7_8_VGluT 99..512 CDD:340940 226/427 (53%)
slc17a6bNP_001122293.1 MFS_SLC17A6_7_8_VGluT 73..498 CDD:340940 226/427 (53%)

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