DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGlut and slc17a6b

DIOPT Version :9

Sequence 1:NP_001245848.1 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_001122293.1 Gene:slc17a6b / 100149756 ZFINID:ZDB-GENE-030616-554 Length:584 Species:Danio rerio


Alignment Length:614 Identity:279/614 - (45%)
Similarity:358/614 - (58%) Gaps:73/614 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 EMEGGDREG----RGPGGGHAYD--DDDDRPDSPASFEEIERPPLRKIDKYCKAECPC--MPARY 96
            |..|..:||    .|...||.|.  :...:|.......|..||......|....:|.|  :|.||
Zfish     6 EPAGFSKEGLKQLAGKTLGHVYRVIEKRQKPGENIELTEDGRPAQINERKAPLCDCTCFGLPRRY 70

  Fly    97 TIATMACVGFMIAFGMRCNMSAAKLKGEHNGTVFM------------NWTVAVESHVDSSFFWGY 149
            .||.|:.:||.|:||:|||:..|.:...:|.|:.:            ||.......:..||||||
Zfish    71 IIAIMSGLGFCISFGIRCNLGVAIVSMVNNSTIHLNGKIIIKEKAKFNWDPETVGLIHGSFFWGY 135

  Fly   150 LVTQIPGGFIASKFPANKIFGLSIVSSATLHLFVPFAMTLMHGH--VVICVRVLQGLFEGVTYPA 212
            :|||||||:|:|:..||::||.:|:.::||::|:|.|   ..||  .||.||:||||.|||||||
Zfish   136 IVTQIPGGYISSRLAANRVFGAAILLTSTLNMFIPSA---ARGHYGCVIFVRILQGLVEGVTYPA 197

  Fly   213 CHGIWRFWAPPMERSRLATLAFSGSYAGVVVGLPLSGLLADAVGYQAPFYAYGVFGIIWYMFWIW 277
            |||||..||||:|||||||.:|.|||||.|:.:||:|:|....|:.:.||.||.|||.||||||.
Zfish   198 CHGIWSKWAPPLERSRLATTSFCGSYAGAVIAMPLAGILVQYTGWSSVFYVYGCFGIFWYMFWIL 262

  Fly   278 LCFENPRKHPAISIPELKYIEKSLGESAHPTMPSLK-TTPWREMMRSMPVYAIIVANFCRSWNFY 341
            :.:|:|.:||.|:..|..|||:|:||||....|:.| .||||:...||||||||||||||||.||
Zfish   263 VSYESPAEHPTITAEERCYIEESIGESAKLLGPADKFKTPWRKFFTSMPVYAIIVANFCRSWTFY 327

  Fly   342 LLVLFQSSFLKHKFGFKVEEAGFVGSLPHLIMTTIVPFGGMLADHLRKNGILSTTNVRKLFNCGG 406
            ||::.|.::.:..|||::.:.|.:.:||||:||.|||.||.||||||...|||||.|||:.||||
Zfish   328 LLLISQPAYFEEVFGFEISKVGMLSALPHLVMTIIVPIGGQLADHLRSKNILSTTTVRKIMNCGG 392

  Fly   407 FGMEGLFFLFVAHSSTATGAMFALTCGVAFSGFAISGYNVNHLDIAPRYASILMGLSNGIGTLAG 471
            ||||....|.|.:|.:...|:..|...|.||||||||:|||||||||||||||||:|||:|||:|
Zfish   393 FGMEATLLLIVGYSHSKGVAISFLVLAVGFSGFAISGFNVNHLDIAPRYASILMGISNGVGTLSG 457

  Fly   472 IIVPYALDGLIQANPTGCWTTVFTLAACVHLVGCTFYGIFASGELQPWAEPPAEEQKVWAPPPGA 536
            ::.|..:..:.:......|..||.:|:.||..|..|||||||||.||||:|..            
Zfish   458 MVCPLIVGAMTKHKTREEWQYVFLIASLVHYGGVIFYGIFASGEKQPWADPEL------------ 510

  Fly   537 ITNTDPSQAGML--GDYMKET--------SFGAPEYTEQSQMQQSTAISYGATGHVANNPFAMAS 591
               |...:.|.:  .:..:||        :.|||            |.|||||..:..   ..|.
Zfish   511 ---TSDEKCGFIDEDELAEETGDITQSYGALGAP------------AKSYGATTQLNG---GWAE 557

  Fly   592 GAPPIAEEDAPPTY-GDVTNPGQYGYTQG 619
            |      .|....| .|....|.|||.||
Zfish   558 G------WDKREEYVQDGVEEGGYGYRQG 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGlutNP_001245848.1 MFS 98..512 CDD:119392 227/428 (53%)
MFS_1 101..475 CDD:284993 213/388 (55%)
slc17a6bNP_001122293.1 2A0114euk 69..509 CDD:129972 238/442 (54%)
MFS 74..498 CDD:119392 225/426 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582642
Domainoid 1 1.000 435 1.000 Domainoid score I549
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 501 1.000 Inparanoid score I1329
OMA 1 1.010 - - QHG53923
OrthoDB 1 1.010 - - D144672at33208
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 1 1.000 - - otm26323
orthoMCL 1 0.900 - - OOG6_100421
Panther 1 1.100 - - LDO PTHR11662
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1866
SonicParanoid 1 1.000 - - X201
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1312.940

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