DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Atxn7 and SGF73

DIOPT Version :9

Sequence 1:NP_001259932.1 Gene:Atxn7 / 33423 FlyBaseID:FBgn0031420 Length:971 Species:Drosophila melanogaster
Sequence 2:NP_011449.1 Gene:SGF73 / 852814 SGDID:S000003034 Length:657 Species:Saccharomyces cerevisiae


Alignment Length:580 Identity:118/580 - (20%)
Similarity:201/580 - (34%) Gaps:150/580 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 SPTDTLSASTLSSCSNGSSSSASLQHPAAAGSSSTTSSSSSSRHK------------------SS 226
            |.||....||..:..||..|:         |.::....:|:..:.                  ..
Yeast   105 SSTDPRDESTRETIRNGVEST---------GRNNNDDDNSNDNNNDDDDDDDNDDNEDDDDADDD 160

  Fly   227 SSKSSSSSSSKGSSSTSAGSRSRSKSSKN------RHHSSPAPALLESNHKESKGSKKSSAIAAP 285
            ...|:.::..|..||.:...||.|..|.|      :...:..|....|:.|:.|..|:.:     
Yeast   161 DDNSNGANYKKNDSSFNPLKRSTSMESANTPNMDTKRSKTGTPQTFSSSIKKQKKVKQRN----- 220

  Fly   286 PVVAAVV---KE---EPPSVGAAPAAITMFSSSSN-----SSCSLP-----------PTPTLGAA 328
            |....::   |:   |.|..|....::|..|.|..     |..|.|           ....:|||
Yeast   221 PTEKHLIDFNKQCGVELPEGGYCARSLTCKSHSMGAKRAVSGRSKPYDVLLADYHREHQTKIGAA 285

  Fly   329 SSEVAMGVNYSPAQLQTDAEKLPELQPKKKLKGSSDHRIKAEKE-KNKDKSLVNSYEQQQVLSEL 392
            :.:.|........|.|...|:....|.:|:.:.|....:...|. ||..||.|::...   ::|:
Yeast   286 AEKRAKQQELQKLQKQIQKEQKKHTQQQKQGQRSKQRNVNGGKSAKNGGKSTVHNGNN---INEI 347

  Fly   393 DQAVSSITGAVSAEQVAPDEEELPLPNTSDENSISQTLDEMLDSKLINEI-------------LN 444
                    |.|:   :.|:||     .|...|.:|::....|:|.:::.:             .:
Yeast   348 --------GHVN---LTPEEE-----TTQVLNGVSRSFPLPLESTVLSSVRYRTKYFRMREMFAS 396

  Fly   445 NFDESALDTSQQQSQQQAQNGSLSHPAQATKRLRFEDGTIGEDYAVYQQQAVQQVYGEEEHQQEL 509
            :|......||.......::.|.|.           .|.|....:.|...|.:..:..:       
Yeast   397 SFSVKPGYTSPGYGAIHSRVGCLD-----------LDRTTDYKFRVRTPQPINHLTNQ------- 443

  Fly   510 TTIDAMQLQQLIYQQQQMLEQQQLQEQQQQQQQDQKLQDHEQQRQFSVYN-----VPSLTDEAMV 569
             .::..|:|:|  |||:.|:.|.|.:|||||||.|:....:.|.|.|...     ||:.......
Yeast   444 -NLNPKQIQRL--QQQRALQAQLLSQQQQQQQQQQQHHSPQAQAQASTQQPTQGMVPNHFPGGAT 505

  Fly   570 N------------PQQQQLEEHM-----ILPSIIYEITESNPVSMLEQ---KVLAEFLTNAGYEN 614
            |            .||||.::|.     :.|..|....:......|:|   :..|.:|.||    
Yeast   506 NSSFNANVSSKQIQQQQQQQQHKSQDTGLTPLEIQSQQQKLRQQQLQQQKFEAAASYLANA---- 566

  Fly   615 VDVNVVQSGGIQTNLSSGTEANQLADELADFEFSKLETVSDTVKTVKLEAKAASQPPTTN 674
              ..::|.....::| |||..|..:..    ..:.|.|:..::.:......:...||:.|
Yeast   567 --TKLMQESNQDSHL-SGTHNNNSSKN----GNNNLMTMKASISSPNTSVNSIQSPPSVN 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atxn7NP_001259932.1 None
SGF73NP_011449.1 zf_C2H2_13 59..100 CDD:408299
SCA7 219..278 CDD:400555 11/63 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4140
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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