DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atxn7 and atxn7l2a

DIOPT Version :9

Sequence 1:NP_001259932.1 Gene:Atxn7 / 33423 FlyBaseID:FBgn0031420 Length:971 Species:Drosophila melanogaster
Sequence 2:XP_005172962.1 Gene:atxn7l2a / 692316 ZFINID:ZDB-GENE-060519-13 Length:723 Species:Danio rerio


Alignment Length:969 Identity:173/969 - (17%)
Similarity:279/969 - (28%) Gaps:347/969 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 GQKWQQVFDMEKVIKQLRTAEKTYLRGGKNSSAGADQQAKVQVQRLQSADMAYYDLAPKLASRDI 115
            ||.|....:...:.....:....|.:.||.:         ::...|:..||:.:...|......:
Zfish    27 GQSWSVWTERANLTASEGSDGDEYSKNGKKT---------METMTLRKEDMSIFGHYPGQDDFYL 82

  Fly   116 VLCSSCSGCYTKAGFQHHIALQHPSVWEATSSKVNPNPNGTAISSDSRLTATEISQEGGAIVPSS 180
            |:||.||.......|:.|...:|             .|.| .:.:..|.|.....|:......:.
Zfish    83 VVCSHCSQVVKPQAFEKHCERRH-------------GPLG-KLYAHLRSTPPPSQQQRPRHGHTP 133

  Fly   181 PTDTLSASTLSSCSNGSSSSASLQHPAAAGSSSTTSSSSSSRHKSSSSKSSSSSSSKGSSSTSAG 245
            |:...:||......|.....||.|.||         :....||..........|.|..|:|.   
Zfish   134 PSHGATASWSGRNQNVGPPRASPQSPA---------TPPQFRHSKPPKDGVWHSPSNSSNSA--- 186

  Fly   246 SRSRSKSSKNRHHSSPAPALLESNHKESKGSKKSSAIAAPPVVAAVVKEEPPSVGAAPAAITMFS 310
                                    |.||                ||.|:.||        |....
Zfish   187 ------------------------HSES----------------AVFKQPPP--------IEPTR 203

  Fly   311 SSSNSSCSLPPTPTLGAASSEVAMGVNYSPAQLQTDAEKLPELQ---------PKKKLKGSSDHR 366
            ||...:...||.|..|.           ||.:|...||: |:.|         |...|:|:..|:
Zfish   204 SSPPPAHRDPPWPHGGP-----------SPNRLPPAAER-PQSQRGEAASAPVPSGHLRGTKTHK 256

  Fly   367 IKAEKEKNKDKSLVNSYEQQQVLSELDQAVSSITGAVSAEQVAPDEEELPLPNTSDENSISQTLD 431
            :.::||.:.||..                                                    
Zfish   257 MVSKKECDLDKHC---------------------------------------------------- 269

  Fly   432 EMLDSKLINEILNNFDESALDTSQQQSQQQAQNGSLSHPAQATKRLRFEDGTIGEDYAVYQQQAV 496
                             ..|||.:::...:....::                    ::::|::.|
Zfish   270 -----------------GVLDTERKKVCTRLLTCNI--------------------HSIHQRRKV 297

  Fly   497 QQVYGEEEHQQELTTIDAMQLQQLIYQQQQMLEQQQLQEQQQQQQQDQKLQDHEQQRQFSVYNVP 561
            |   |..::..:|..                               :.|:....::|   |...|
Zfish   298 Q---GRSKNFDQLVA-------------------------------ELKMSSKARER---VSQAP 325

  Fly   562 SLTDEAMVNPQQQQLEEHMILPSIIYEITESNPVSMLEQKVLAEFLTNAGYENVDVNVVQSGGIQ 626
            ..:....|:|:..:  :....||....:|.|           ..|.|....|:::.:       :
Zfish   326 ESSSAPSVSPEPPR--DTPAPPSCRRPLTNS-----------PAFRTPVSSESIEED-------K 370

  Fly   627 TNL-SSGTEANQLADELADFEFSKLETVSDTVKTVKLEAKAASQPPTTNPQINHHPSLANAKYHE 690
            |:| .|.|.|:   ..|.....|..|:..:|                     |..|    |.:|.
Zfish   371 THLEESSTRAH---SPLTQAHISGDESEGET---------------------NEEP----ADWHS 407

  Fly   691 DSYFNVMLYSGAPRPLAMNTFGMVKLPQGLGVTFRKNLLTTRKANNNLLSLSGGNHLGVVGQLAR 755
            ..:.        |:|.|:.:||...|..|: .||.:.|...|.|.:.::......||......|.
Zfish   408 TPWH--------PKPAALCSFGSHSLGHGV-FTFDRRLHHLRSAMSAMVESHLSAHLWKKIPQAS 463

  Fly   756 TPPPPSPALSNGLPGKNPASGRTIYAQRSNVIA--QDRLRCNKRALVGGKAGG------GSSGSP 812
            .|...||   ...|...|||..:| :|.|...|  .:.....|.:.......|      .||.|.
Zfish   464 DPQSQSP---QAKPAAVPASPSSI-SQHSKPRAGSHNTTSSLKTSFYSSHGPGKEPNPQSSSTSK 524

  Fly   813 GVMTAKRLNELLMGKAKKEEKPPPDSEDGGEQPTKDKERDKEED----------NKLTFSFYEKR 867
            ....::......:|::..:..|.......| :|:|.:.|.:|.|          .|...||.:..
Zfish   525 AYAQSENSGSSKLGRSPSQSGPGRPKNPVG-RPSKQQMRLRESDRTPTPDAAALRKRKASFEDSD 588

  Fly   868 RRLLAGKLEQLQPLGRP--SFTLP----------LQSNHNASQSQSHSPQQLLKKQLLRTLSDS- 919
            ..:...|....|...||  |.|.|          |.....|..|.||||.....|:..::..|| 
Zfish   589 SAVSPDKNCVPQNKSRPLISKTPPSASHGQTNGSLSPGSKARPSDSHSPSSWAFKRTHQSAPDSR 653

  Fly   920 --SSNMNISNMNNISNLNSSNTPSANSNPP----------------W---KGNSSNPGG 957
              .|.:.:|:.::.|  ......|:.|:||                |   ||:..:.||
Zfish   654 GLDSGLRVSSFDHKS--LGKKRKSSGSSPPSKPHRLPTSPHSGFYTWKESKGSGLSVGG 710

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atxn7NP_001259932.1 None
atxn7l2aXP_005172962.1 SCA7 250..312 CDD:285508 14/184 (8%)
DHQ_Fe-ADH 322..>385 CDD:295526 15/85 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4140
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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