DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atxn7 and atxn7l2b

DIOPT Version :9

Sequence 1:NP_001259932.1 Gene:Atxn7 / 33423 FlyBaseID:FBgn0031420 Length:971 Species:Drosophila melanogaster
Sequence 2:NP_001002655.2 Gene:atxn7l2b / 436928 ZFINID:ZDB-GENE-040718-403 Length:666 Species:Danio rerio


Alignment Length:228 Identity:54/228 - (23%)
Similarity:85/228 - (37%) Gaps:41/228 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   193 CSN----------GSSSSASLQHPAAAGSSSTTSSSSSSRHKSSSSKSSSSSSSKGSSSTSAGSR 247
            |||          .:.|||.: |..:...:||:..|..|..|:||.:.:.:.|:.|.......|:
Zfish   430 CSNQQQITYNSHDATRSSAPI-HITSTLRTSTSGQSEPSNLKASSKRPTKAQSASGPVRPRQTSK 493

  Fly   248 SRSKSSKNRH-HSSPAPALLESNHKESKGSKKSSAIAAPPVVAAVVKEEPPSVGAAPAAITMFSS 311
            ..|..:..|. ..||..:....:.||.|.|...|.:...|    ..::...|:.:.|..  :|:.
Zfish   494 QASLQTGFRELQDSPTASKRRKSPKEDKDSSGQSKMLFVP----HQRDHQSSLISPPHG--LFNG 552

  Fly   312 SSNSSCSLPPTPTLGAASSEVAMGVNYSPAQLQTDAEKLPELQPKKKLKGSS--DHR-----IKA 369
            :..||....|..|.|.        |..|||.:...:.     .|:.:..|||  .||     :|.
Zfish   553 THPSSSKTRPPETKGR--------VKQSPALISISSP-----SPECERGGSSGLSHRSDGFELKG 604

  Fly   370 EKEKNKDKS---LVNSYEQQQVLSELDQAVSSI 399
            .|.|....|   ..:...:..:||.|.|..|.:
Zfish   605 RKRKTSGASPPKNTSCAPKANILSPLSQTHSGL 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atxn7NP_001259932.1 None
atxn7l2bNP_001002655.2 SCA7 221..277 CDD:285508
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4140
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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