DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Atxn7 and Atxn7

DIOPT Version :9

Sequence 1:NP_001259932.1 Gene:Atxn7 / 33423 FlyBaseID:FBgn0031420 Length:971 Species:Drosophila melanogaster
Sequence 2:XP_006518078.1 Gene:Atxn7 / 246103 MGIID:2179277 Length:920 Species:Mus musculus


Alignment Length:1030 Identity:190/1030 - (18%)
Similarity:323/1030 - (31%) Gaps:344/1030 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 DSSAGSNSGSGSAGLSL---------FSLQGQKWQQVFDMEKVI-KQLRTAEKTYLRGGKNSSAG 84
            |...|..:.|.:|..::         .::.||.|....:..|:. |.....::::...|||.   
Mouse    49 DGGTGDTTTSAAAMATVGERRPLPSPEAMLGQSWNLWVEASKLPGKDGTELDESFKEFGKNR--- 110

  Fly    85 ADQQAKVQVQRLQSADMAYYDLAPKLASRDIVLCSSCSGCYTKAGFQHHIALQHPSVWEATSSKV 149
                   :|..|...||..:.|.|......:|:|:.|:.......||.|...:|.|         
Mouse   111 -------EVMGLCREDMPIFGLCPAHDDFYLVVCNDCNQVVKPQAFQSHYERRHSS--------- 159

  Fly   150 NPNPNGTAISSDSRLTATEISQEGGAIVPSSPTDTLSASTLSSCSNGSSSSASLQHPAAAGSSST 214
                                |.:....||.:...:|..|.  |.|.||.:..|.:.|:   ....
Mouse   160 --------------------SSKPALAVPHTSVFSLLPSL--SKSKGSGAGGSSRPPS---GGVL 199

  Fly   215 TSSSSSSRHKSSSSKSSSSSSSKGSSSTSAGSRSRSKSSKNRHHSSPAPAL-LESNHKESKGSKK 278
            .:||||...:....|.....:.|.....        :..|..|.....|:: :|..|.:..|:..
Mouse   200 CASSSSKLLRLPKEKLPLRGNMKPMHPV--------QQIKVPHGRVMTPSVKVEKMHPKMDGTLL 256

  Fly   279 SSAI--AAPPVVAAVVKEEPPSVGAAPAAITMFSSSSNSSCSLPPTPTLGAASSEVAMGVNYSPA 341
            .|.:  |.|..:::.||   |.:                :|...|.|||.            ||.
Mouse   257 KSTVGPACPATMSSAVK---PGL----------------NCPSIPKPTLP------------SPG 290

  Fly   342 QLQTDAEKLPELQP-KKKLKGSSDHR--------------------IKAEKEKNKDKSL---VNS 382
            |: .:.:.||.:.. :||.:.||::|                    |..:.:|...:||   .:|
Mouse   291 QI-LNGKGLPAMPTLEKKSEDSSNNRKFLNKRLSEREFDPDIHCGVIDLDTKKPCTRSLTCKTHS 354

  Fly   383 YEQQQVLSELDQAVSSITG-----AVSAEQVAPDEEELP---------LPNTSDENSISQTLDEM 433
            ..|::.:....:....:..     |...|.:..|.:::|         .|.|..|..:.......
Mouse   355 LTQRRAVQGRRKRFDVLLAEHKNKAREKELIRHDSQQVPHPLRDPHPTPPRTPQEPQLPAESKPF 419

  Fly   434 LDSKLINEILNNFDESALDTSQQQSQQQ-----AQNGSLS-----------HP----AQATKRLR 478
            |.||              ...|..|..:     ||.|..:           ||    .:...||.
Mouse   420 LASK--------------PKPQTPSLPRPPGCPAQQGGSTPIDPPPGQESPHPPLPATEPASRLS 470

  Fly   479 FEDGTIGEDYAVYQQQAVQQV----YGEEEHQQELTTIDAMQLQQLIYQQQQMLEQQQ-----LQ 534
            .|:|. |:|    ::::|:::    .|.........|..:.|:.:..|.......:.:     :.
Mouse   471 SEEGE-GDD----REESVEKLDCHYSGRHPQPASFCTFGSRQIGRGYYVFDSRWNRLRCALNLMV 530

  Fly   535 EQQQQQQQDQKLQDHEQQRQFSVYNVPSLTDEAMVNPQQQQLEEHMILPSIIYEITESNPVSMLE 599
            |:....|..:|:..           ||..|     :|...::...          |.|.|.|...
Mouse   531 EKHLNAQLWKKIPP-----------VPCTT-----SPVSARVPHR----------TNSVPTSQGG 569

  Fly   600 QKVLAEFLTNAGYENVDVNVVQSGGIQTNLSS----GTEAN-QLADELADFEFSKLETVSDTVKT 659
            ...||....:|     ...::.|..|..|..|    ||..| |.|...|          .|.|.:
Mouse   570 ISYLAATTVSA-----PPVLLSSTCISPNSKSVPAHGTTLNAQPAGSGA----------MDPVCS 619

  Fly   660 VK-LEAKAASQPPTTNPQINHHPSLANAKYHEDSYFNVMLYSGAPRPLAMNTFGMVKLPQ----G 719
            |: .:..|:|.||:|...::..||                     .||:       :.||    .
Mouse   620 VQSRQVSASSSPPSTPSGLSSVPS---------------------SPLS-------RKPQKWKPS 656

  Fly   720 LGVTFRKNLLTTRKANNNLLSLSGGNHLGVVGQLARTPPPPSPALSNGLPGKNPASGRTIYAQRS 784
            ..:..:::...:...:|...|.|||:     |:..:...|.....|:.....:.:|..::.:.|.
Mouse   657 KSIRPKESSALSTNCHNASSSTSGGS-----GKKRKNSSPLLVPSSSSSSSSSSSSSHSVNSFRK 716

  Fly   785 NVIAQDRLRCNKRALVGGKAGGGSSGSPGVMTAKRLNELLMGKAKKEEKPPPDSEDGGEQPTKDK 849
            |.:|.                   ||:|.:.||                  |.|...|.....:|
Mouse   717 NCVAH-------------------SGTPYLSTA------------------PSSHSIGLNCVTNK 744

  Fly   850 ERDKEEDNKLTFSF---YEKRRRLLAGKLEQLQPLGRPSFTLPLQSN--------HNASQ----S 899
                      |.|.   :|:..|..|| :...:|:.|.|..:....:        |.||:    .
Mouse   745 ----------THSVSLRHEQAGRGPAG-VSSAEPIKRMSVMVNSSDSTLSLGPFIHQASELPVNP 798

  Fly   900 QSHSP-QQLLKKQLLRTLSDSSSNMNISN-----------MNNISNLNSSNTPSA 942
            .||:| .:|:.|:  |..|..||.:..|.           |||:...::.|...|
Mouse   799 HSHTPLDKLIGKK--RKCSPGSSTVGNSGSKPTKVAKLPAMNNVHMKHTGNISGA 851

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atxn7NP_001259932.1 None
Atxn7XP_006518078.1 SCA7 319..378 CDD:369807 11/59 (19%)
PHA03247 <382..616 CDD:223021 46/299 (15%)
VIR_N <390..>468 CDD:374218 15/94 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4140
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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